DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm1 and TRM1

DIOPT Version :10

Sequence 1:NP_609566.1 Gene:Trm1 / 34656 FlyBaseID:FBgn0032430 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_010405.3 Gene:TRM1 / 851698 SGDID:S000002527 Length:570 Species:Saccharomyces cerevisiae


Alignment Length:534 Identity:198/534 - (37%)
Similarity:306/534 - (57%) Gaps:26/534 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQIIAENPNENVIRERNAEIV--SGGNVFYNPVQEFNRDLSIAAL----NVYRQRLTKERSEKAL 66
            |:|..|  :.|:::|..|||:  ....|||||:|:||||||:..:    |:|.:...::|:.|..
Yeast    35 PRINIE--DFNIVKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAWDNLYGEECGQKRNNKKS 97

  Fly    67 KKQRKKVKEQEDEKTTPVPEDPPVYEAG--TRYEDGLRILEALAATGLRSIRYAQEIAGVRQIVA 129
            ||:|......:..|...:....|....|  .|.|..:.|||||:|||||:||||.||..||:::|
Yeast    98 KKKRCAETNDDSSKRQKMGNGSPKEAVGNSNRNEPYINILEALSATGLRAIRYAHEIPHVREVIA 162

  Fly   130 NDLSRQAVASINTNIRHNKVEELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYGCPNRFLDGAMQ 194
            |||..:||.||..|:.:|.||.:::|:..||..|||.:.....:|..:||||||....|:|.|:|
Yeast   163 NDLLPEAVESIKRNVEYNSVENIVKPNLDDANVLMYRNKATNNKFHVIDLDPYGTVTPFVDAAIQ 227

  Fly   195 CLVDGGLLLVTATDMAVLAGNA-PEACYVKYGSVPL-RMKCCHEMALRILLHCIESHANRYGKYI 257
            .:.:|||:|||.||::|||||. ||.|:..||...: ..:..||.|||::|:.::..|.:|.|.:
Yeast   228 SIEEGGLMLVTCTDLSVLAGNGYPEKCFALYGGANMVSHESTHESALRLVLNLLKQTAAKYKKTV 292

  Fly   258 EPLLSISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTGCETFTLQPLGITKPNPTAGNPQQLK 322
            |||||:|.|||:|:||:|.....:.|..||.....|.|:.|.::..||||.........|....|
Yeast   293 EPLLSLSIDFYVRVFVKVKTSPIEVKNVMSSTMTTYHCSRCGSYHNQPLGRISQREGRNNKTFTK 357

  Fly   323 FGIPTGPAVNSQCEHCGHRHHLGGPIWSAPIHNPEFVQDLLTAVQETTL---QSLGTQRRIVGVL 384
            :.:..||.|:::|:.|...:||.||:::.|:||.||::::|...:|...   .:.||::||.|:|
Yeast   358 YSVAQGPPVDTKCKFCEGTYHLAGPMYAGPLHNKEFIEEVLRINKEEHRDQDDTYGTRKRIEGML 422

  Fly   385 SMVQEELQDVPLYYTPDKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVLWD 449
            |:.:.||.|.|.|::|:.:..|:||::.|:.|..:.:...|:..|.:||..:|||||||...:|.
Yeast   423 SLAKNELSDSPFYFSPNHIASVIKLQVPPLKKVVAGLGSLGFECSLTHAQPSSLKTNAPWDAIWY 487

  Fly   450 IL-------RSWSKRHP-VNPERMIPGSP--LAAILSKECTAVYEFDELHPEAN-PKSRKSALSR 503
            ::       :..||.:| ....:::...|  |:..:..|..:...|.......| .|.||..:.|
Yeast   488 VMQKCDDEKKDLSKMNPNTTGYKILSAMPGWLSGTVKSEYDSKLSFAPNEQSGNIEKLRKLKIVR 552

  Fly   504 FQENPTPHWGPGTR 517
            :|||||.:|||..|
Yeast   553 YQENPTKNWGPKAR 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm1NP_609566.1 AdoMet_MTases 17..452 CDD:473071 174/454 (38%)
TRM1NP_010405.3 TRM1 45..495 CDD:273006 173/449 (39%)

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