DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm1 and trmt1

DIOPT Version :10

Sequence 1:NP_609566.1 Gene:Trm1 / 34656 FlyBaseID:FBgn0032430 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_685886.4 Gene:trmt1 / 553298 ZFINID:ZDB-GENE-060810-40 Length:672 Species:Danio rerio


Alignment Length:552 Identity:262/552 - (47%)
Similarity:341/552 - (61%) Gaps:38/552 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PNENVIRERNAEIV--SGGNVFYNPVQEFNRDLSIAALNVYRQRLTKERSEKAL---KKQRKKVK 74
            |.|.|:||..|.|:  :...|||||||||||||:.|.:..:.:....:|..:.|   :|.|..|:
Zfish    88 PGETVVREGKAAILFPNANEVFYNPVQEFNRDLTCAVITEFARDQLAQRGVRILVPGEKDRVVVQ 152

  Fly    75 EQEDEK--------TTPVPEDPPVYEA----------GTRYEDGLRILEALAATGLRSIRYAQEI 121
            ..||:.        ..|..|.|...||          |.|.|.|||:||.|||:||||:|:|.|:
Zfish   153 LSEDKNGAGDQEAPEQPEQEHPKEEEAAEKEYITATVGERCEQGLRVLEGLAASGLRSVRFALEV 217

  Fly   122 AGVRQIVANDLSRQAVASINTNIRHNKVEELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYGCPN 186
            .|::.|.|||.|.:|.|.|..|.:||.|..:::.|..||..:||.:...::|:|.:||||||.|:
Zfish   218 PGLKSITANDYSAKAAALIARNAQHNNVTHILQASQRDASMVMYEARGRKERYDVIDLDPYGSPS 282

  Fly   187 RFLDGAMQCLVDGGLLLVTATDMAVLAGNAPEACYVKYGSVPLRMKCCHEMALRILLHCIESHAN 251
            .|||.|:|.:.:||||.:|.|||||:|||:.|.||.|||||.::.|.||||||||:||.::..|.
Zfish   283 PFLDSAVQAVSEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKSKYCHEMALRIILHSLDQRAA 347

  Fly   252 RYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTGCETFTLQPLGITKPNPTAG 316
            .|.:|||||||:|.|||||:||||..||...|.|.|||:.:|.|.||..|.||.:|     ....
Zfish   348 VYQRYIEPLLSVSVDFYIRVFVRVKTGQVVVKNSASKQALVYNCVGCGAFHLQRMG-----KRIN 407

  Fly   317 NPQQLKFGIPTGPAVNSQCEHCGHRHHLGGPIWSAPIHNPEFVQDLLTAVQETTLQSLGTQRRIV 381
            ..:.:|:...|||.|...|||||.||.||||.|:.|:|:..|||.:|.||.....: ..|.:||.
Zfish   408 QGKHMKYSAATGPPVGPNCEHCGQRHQLGGPAWAEPLHDINFVQKVLGAVSGNPTR-FRTSKRIE 471

  Fly   382 GVLSMVQEELQDVPLYYTPDKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAV 446
            |:||||.|||||||||||.|.|...:.....||::||||:||||||||:|||.||::||:||..|
Zfish   472 GMLSMVTEELQDVPLYYTLDHLSSTVHRSTPPMMQFRSALLHAGYRVSFSHACKNAVKTDAPAGV 536

  Fly   447 LWDILRSWSKRHPVNPERMIPGSPLAAILSKECTAVYEFDELHPEANPKSRKSALSRFQENPTPH 511
            ||||:|.|.:.:||..||:...||...|||||.|....| |:..:|||:|||..|:||||||..:
Zfish   537 LWDIMRCWERSNPVKRERLSETSPAHHILSKETTLEACF-EIREDANPQSRKRHLTRFQENPQAN 600

  Fly   512 WGPGTRATIMIG------DNKLPKSYRNQNKK 537
            |||..||....|      |.:  |.::.:.||
Zfish   601 WGPKARAKAGGGIASELEDKR--KQFQGKRKK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm1NP_609566.1 AdoMet_MTases 17..452 CDD:473071 222/457 (49%)
trmt1XP_685886.4 TRM 89..542 CDD:396545 222/458 (48%)
ZnF_C3H1 639..663 CDD:214632
Blue background indicates that the domain is not in the aligned region.

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