DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm1 and Trmt1

DIOPT Version :10

Sequence 1:NP_609566.1 Gene:Trm1 / 34656 FlyBaseID:FBgn0032430 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_932137.2 Gene:Trmt1 / 212528 MGIID:1289155 Length:663 Species:Mus musculus


Alignment Length:573 Identity:270/573 - (47%)
Similarity:350/573 - (61%) Gaps:49/573 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEKPQIIAENPNENV--IRERNAEIV--SGGNVFYNPVQEFNRDLSIAALNVY-RQRL------T 58
            ||:|      |.:.|  :.|..|:||  |...|||||||||||||:.|.:..: |..|      .
Mouse    47 EERP------PADPVATVTEGAAKIVFPSANEVFYNPVQEFNRDLTCAVITEFARIHLGAKGIQI 105

  Fly    59 KERSEKALKKQRKKVKEQEDE----KTTPVPED-PPVYEAGTRYEDGLRILEALAATGLRSIRYA 118
            |...||..:|....:.:||:|    .....|.| |.....|...|:|||:||.|||:||||||:|
Mouse   106 KVPGEKDSEKIAVDLSDQEEETAGKNENLAPGDWPRTAAVGEICEEGLRVLEGLAASGLRSIRFA 170

  Fly   119 QEIAGVRQIVANDLSRQAVASINTNIRHNKVEELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYG 183
            .|:.|::.:||||.|.:||..::.|:..|.|..|::|:.:||..|||...:..:|||.:||||||
Mouse   171 LEVPGLQSVVANDASARAVELMHRNVELNGVAHLVQPNQADARMLMYQHQKAPERFDVIDLDPYG 235

  Fly   184 CPNRFLDGAMQCLVDGGLLLVTATDMAVLAGNAPEACYVKYGSVPLRMKCCHEMALRILLHCIES 248
            .|..|||.|:|.:.|||||.||.|||||||||:.|.||.|||::.|:.:.||||||||:||.::.
Mouse   236 SPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDL 300

  Fly   249 HANRYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTGCETFTLQPLGITKPNP 313
            |||.|.:||.||||||||||||:||||:.|||:.|.|.|||:.::||.||..|.||.||     .
Mouse   301 HANCYQRYIVPLLSISADFYIRVFVRVFTGQAKVKSSASKQALVFQCVGCGAFYLQRLG-----K 360

  Fly   314 TAGNP-QQLKFGIPTGPAVNSQCEHCGHRHHLGGPIWSAPIHNPEFVQDLLTAVQETTLQSLGTQ 377
            .:|:| .::||....||.|..:|||||.||.||||:|:.|||:.:||..:|.|| .|......|.
Mouse   361 ASGDPGGRIKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLDAV-TTNPGRFHTS 424

  Fly   378 RRIVGVLSMVQEELQDVPLYYTPDKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNA 442
            .||.||||:|.|||.|||||||.|:|...:......:|:.|||:||||:|||.|||.||::||:|
Mouse   425 MRIQGVLSVVTEELPDVPLYYTLDQLSSTIHCNTPRLLQLRSALLHAGFRVSLSHACKNAVKTDA 489

  Fly   443 PPAVLWDILRSWSKRHPVNPERMIPGSPLAAILSKECTAVYEFDELHPEANPKSRKSALSRFQEN 507
            ||..||||:|.|.|..||..||:...||...||:.|......|: :..:|||.||:..|.|||.|
Mouse   490 PPEALWDIMRCWEKECPVKRERLSESSPAFRILAVEPRLKANFN-IREDANPSSRQRGLKRFQAN 553

  Fly   508 PTPHWGPGTRA--------TIMIGDNKLPKSYRNQNKKQRHKASEQQAEDDQQ 552
            |..:|||..||        ..:.|..:|     .|||:      ::.|||..|
Mouse   554 PEANWGPRPRARPGGKAASEDLAGRRRL-----LQNKR------KEPAEDPAQ 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm1NP_609566.1 AdoMet_MTases 17..452 CDD:473071 228/451 (51%)
Trmt1NP_932137.2 TRM 65..499 CDD:396545 225/439 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 534..574 16/39 (41%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q9NXH9 540..572 14/31 (45%)
ZnF_C3H1 599..625 CDD:214632
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..663
Blue background indicates that the domain is not in the aligned region.

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