Sequence 1: | NP_609561.2 | Gene: | Pkd2 / 34651 | FlyBaseID: | FBgn0041195 | Length: | 924 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948500.1 | Gene: | Pkd1l1 / 289796 | RGDID: | 1564724 | Length: | 2586 | Species: | Rattus norvegicus |
Alignment Length: | 763 | Identity: | 136/763 - (17%) |
---|---|---|---|
Similarity: | 246/763 - (32%) | Gaps: | 230/763 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 195 GSSTPPS---------PSRGHRAPSIIAASALQNRAKTNRILYTTDEEVREALVEFSVFIIFLIL 250
Fly 251 TSLVVLSVRHTYMFYFNDTMKKLFTNREMVVAPSVTVGFEKLITVPDWWDYLKYNFLVTLHGDLT 315
Fly 316 FMDDAQANLTSMPPEGSEQGSEQGSEQGSEQSPEEVVGEAPEEAPEMDRLQEDFKYNGNPYIDLR 380
Fly 381 GHRRAKRQSGVDGNSEDGSEDVSGNYLKDDSDSIQANMSFHHLEGRVFLYENLLLGPPRLRQIRV 445
Fly 446 RKESCYVNDAFIRYFNTCYA--AYSSGAEDRKPMHKGSPFRTMHDLD-----STPIWTVLAFYRT 503
Fly 504 GGYTVNLDYDKDRNVKIINDLKDIHWLDRGSRLCLVEFNLFNENTDIFQSIKLIAEIPPTGGVIP 568
Fly 569 QAHLQTVKMYSFFTDRSM--LMTVIYIFWYIMVIYYTIYEITEIRKSGIKIYFCSMLNILDCAIL 631
Fly 632 LGCYLALVYNIWH-SFKVMSLTARAHSDVTYQSLDV--LCFWNIIYVDMMAILAFLVWIKIFKFI 693
Fly 694 SFNKTLVQFTTTLKRCSKDLAGFSLMFGIVFLAYAQLGLLLFGTKHPDFRNFITSILTMIR---- 754
Fly 755 -----MIL-------GDFQYNLIEQANRVLGPIYFLTYILLVFFILLNMFLAIIMETYNTVKGEI 807
Fly 808 TQGRSHLGSYIYRKLSGMLYWITHCGRKRRHHPQASETEDKDAEHDVGAAHDETHEIRKNMTPAE 872
Fly 873 QQYFKDIPQGENQDMVRLNNRVGLLEEILEKLINNMDDI-LKRVEKDY 919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pkd2 | NP_609561.2 | PKD_channel | 402..803 | CDD:285288 | 88/428 (21%) |
Pkd1l1 | XP_038948500.1 | PCC | <242..725 | CDD:188093 | |
GPS | 1398..1436 | CDD:413374 | |||
PLAT_polycystin | 1504..1622 | CDD:238850 | |||
PKD_channel | 2063..2389 | CDD:400395 | 84/460 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166345341 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |