Protein Alignment rho-6 and PCP1

DIOPT Version :10

• Sequence 1: NP_788038.1
• Gene: rho-6 / 34640
• FlyBaseID: FBgn0032415
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_011615.1
• Gene: PCP1 / 852993
• SGDID: S000003333
• Length: 346
• Species: Saccharomyces cerevisiae
• Alignment Length: 218
• Identity: 48/218 - (22%)
• Similarity: 80/218 - (36%)
• Gaps: 59/218 - (27%)

  Fly    68 LWRVP--WFILLMSFVQISLHWIASECMQKVLIFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQ 130
            ||::|  |..|                 ||.::.:.::......::.....|.::|||.:|:...
Yeast   159 LWQLPKCWRFL-----------------QKYMLLQKDYVTSKISIIGSAFSHQEFWHLGMNMLAL 206

  Fly   131 CFIGICLEVEQGHWRLAVVYMVGGVAGSLANAWLQPHLHL------MGASAGVYAMLG--SHV-P 186
            ...|..|....|......:||...:||||.:.|......|      :|||..::.:||  |:: |
Yeast   207 WSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKLARLAIVGPSLGASGALFGVLGCFSYLFP 271

  Fly   187 HLVLNFSQLSHRFARIASLLILLLSDVGFTTYHFCHNHNRNP--------RTSLEAHIGGGVAGI 243
            |               |.:|:.:....|.....|..:...|.        .....||:||.:.|:
Yeast   272 H---------------AKILLFVFPVPGGAWVAFLASVAWNAAGCALRWGSFDYAAHLGGSMMGV 321

  Fly   244 LCGFIV--------YRRLQPANQ 258
            |.|:.:        .||||.|.:
Yeast   322 LYGWYISKAVEKQRQRRLQAAGR 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-6	NP_788038.1	Rhomboid	106..252	CDD:426384	36/170 (21%)
PCP1	NP_011615.1	Rhomboid	186..329	CDD:426384	36/157 (23%)