DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-6 and RHBDF1

DIOPT Version :10

Sequence 1:NP_788038.1 Gene:rho-6 / 34640 FlyBaseID:FBgn0032415 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_047290434.1 Gene:RHBDF1 / 64285 HGNCID:20561 Length:932 Species:Homo sapiens


Alignment Length:160 Identity:42/160 - (26%)
Similarity:71/160 - (44%) Gaps:13/160 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 CMQKVL----IFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQGHWRLAVVYMV 152
            ||..|.    ...||...:::||...:.||:...|..::||||..:...||...|..|:|::|::
Human   711 CMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLL 775

  Fly   153 GGVAGSLANAWLQPHLHLMGASAGVYAMLGSHVPHLVLNFSQLSHRFARIASLLILLLSDVGFTT 217
            .||.|:||:|...|:...:|.:...:.:|......|..::..|:..:.....||.::|       
Human   776 SGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVL------- 833

  Fly   218 YHFCHNHNRNPRTSLEAHIGGGVAGILCGF 247
              |.......|.....|||.|.::|:...|
Human   834 --FLFTFGLLPWIDNFAHISGFISGLFLSF 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-6NP_788038.1 Rhomboid 106..252 CDD:426384 37/142 (26%)
RHBDF1XP_047290434.1 Rhomboid_SP 168..362 CDD:463639
Rhomboid 724..867 CDD:426384 39/147 (27%)
Blue background indicates that the domain is not in the aligned region.

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