Protein Alignment rho-6 and rho

DIOPT Version :10

• Sequence 1: NP_788038.1
• Gene: rho-6 / 34640
• FlyBaseID: FBgn0032415
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_523883.2
• Gene: rho / 38168
• FlyBaseID: FBgn0004635
• Length: 355
• Species: Drosophila melanogaster
• Alignment Length: 217
• Identity: 72/217 - (33%)
• Similarity: 121/217 - (55%)
• Gaps: 22/217 - (10%)

  Fly    54 LTRTIDVG---HVRRKRLWRVPWFILLMSFVQISLHWIASECM-------------QKVLIFKPE 102
            |..:.|:|   :|.|:. |  |||||::|.::|::.......|             ..||:::|:
  Fly    84 LPESEDIGLLKYVHRQH-W--PWFILVISIIEIAIFAYDRYTMPAQNFGLPVPIPSDSVLVYRPD 145

  Fly   103 WNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQGHWRLAVVYMVGGVAGSLANAWLQPH 167
            ..::.||..:||.||::::||..||..|.|.||.|||..|..|:.|:||.|..||||..:.:...
  Fly   146 RRLQVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVDSE 210

  Fly   168 LHLMGASAGVYAMLGSHVPHLVLNFSQLSHRFARIASLLILLLSDVG---FTTYHFCHNHNRNPR 229
            :.|:|||.||||:|.:|:.::.||::.:.....::.|::|.:..|:|   :|.|.......:.|:
  Fly   211 VFLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGSAFAKGPQ 275

  Fly   230 TSLEAHIGGGVAGILCGFIVYR 251
            .|..||:.|.:||:..||:|.:
  Fly   276 VSYIAHLTGALAGLTIGFLVLK 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-6	NP_788038.1	Rhomboid	106..252	CDD:426384	55/149 (37%)
rho	NP_523883.2	Rhomboid	144..297	CDD:426384	56/152 (37%)