DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-6 and rho-7

DIOPT Version :10

Sequence 1:NP_788038.1 Gene:rho-6 / 34640 FlyBaseID:FBgn0032415 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_312303.5 Gene:rho-7 / 1273337 VectorBaseID:AGAMI1_005948 Length:360 Species:Anopheles gambiae


Alignment Length:195 Identity:44/195 - (22%)
Similarity:72/195 - (36%) Gaps:43/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LWRVPWFILLMSFVQISLHWIASECMQKVLIFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCF 132
            |||:|      |.....:.:.||....|.:.         |.:......|...:|:..|:.....
Mosquito   169 LWRIP------SLAPTMVKYFASNPAAKAVC---------WPMFLSTFSHYSLFHILANMYVLHS 218

  Fly   133 IGICLEVEQGHWRLAVVYMVGGVAGSLAN-----AWLQPHLHLMGASA---GVYAMLGSHVPHLV 189
            .........|..:...||:..||..|.|:     ...||.|.| |||.   |:.|.:.|..|...
Mosquito   219 FSHAAVATLGREQFLGVYLSAGVIASFASHVFKTVTRQPGLSL-GASGTIMGILAYVCSQYPDTQ 282

  Fly   190 LNFSQL-SHRFARIASLLILLLSD-----VGFTTYHFCHNHNRNPRTSLEAHIGGGVAGIL-CGF 247
            |:...| .:.|:..|::.:::..|     :|:..:    :|        .||:||.:.|:. |.|
Mosquito   283 LSILFLPMYTFSAGAAIKVIMGIDLAGVLLGWRIF----DH--------AAHLGGALFGLFWCHF 335

  Fly   248  247
            Mosquito   336  335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-6NP_788038.1 Rhomboid 106..252 CDD:426384 36/157 (23%)
rho-7XP_312303.5 None

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