DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mt2 and trdmt1

DIOPT Version :10

Sequence 1:NP_477475.2 Gene:Mt2 / 34632 FlyBaseID:FBgn0028707 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001004959.2 Gene:trdmt1 / 448379 XenbaseID:XB-GENE-946298 Length:395 Species:Xenopus tropicalis


Alignment Length:402 Identity:148/402 - (36%)
Similarity:214/402 - (53%) Gaps:79/402 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RVLELFSGIGGMHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQ 68
            |||||:|||||||.....:.:..::|||:||||:||.||.:|:....:..::|:.||:||:..|.
 Frog     6 RVLELYSGIGGMHCGLTESGVAAEVVAAVDVNTIANEVYKYNFPYTPLWPKSIEGLSLKELDALS 70

  Fly    69 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPEC-QELEYILMENVKGFESSQARNQFI 132
            .:|:||||||||.||.|||.|..|.|:.:..::..::|.. ::..|||:|||||||:|:||...|
 Frog    71 FDMILMSPPCQPFTRIGLQGDISDPRTKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREALI 135

  Fly   133 ESLERSGFHWREFILTPTQFNVPNTRYRYYCIARKGADFPFA---GGKIWEEMPGAIAQNQGLSQ 194
            .:||:.|:.::||:|:||...:||:|.||:.||:...: |||   ..||.||.|   :|..|..:
 Frog   136 RTLEKGGYAYQEFLLSPTCLGIPNSRLRYFLIAKLQKE-PFAFPTTSKILEEFP---SQCPGSKR 196

  Fly   195 IAEIVEEN------------------------------------------------VSPDFL--- 208
            |....|.|                                                :..|||   
 Frog   197 IIHCSESNPQARVEQKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRMLQDFLEGN 261

  Fly   209 --------VPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVK 265
                    :|...|.:..|::||:.|...||.||||||.||.|||||.....::.|...::   |
 Frog   262 VEEMSQYFLPPKSLLRYALILDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTATDVEIDTVY---K 323

  Fly   266 EIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPETTNRQKYRLLGNSI 330
            .:|...:         :::|..|..:::|||||||::.|..||..|.||.|.|.:|:|||||||:
 Frog   324 SLDLLTE---------EEKLAKLSSLKMRYFTPREISNLHGFPATFGFPEEVTKKQRYRLLGNSL 379

  Fly   331 NVKVVGELIKLL 342
            ||.:|..||..|
 Frog   380 NVHIVSCLISTL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mt2NP_477475.2 AdoMet_MTases 3..342 CDD:473071 147/400 (37%)
trdmt1NP_001004959.2 AdoMet_MTases 5..392 CDD:473071 148/402 (37%)

Return to query results.
Submit another query.