DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL7-like and AT3G13580

DIOPT Version :10

Sequence 1:NP_609543.2 Gene:RpL7-like / 34625 FlyBaseID:FBgn0032404 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_187967.1 Gene:AT3G13580 / 820560 AraportID:AT3G13580 Length:244 Species:Arabidopsis thaliana


Alignment Length:248 Identity:96/248 - (38%)
Similarity:143/248 - (57%) Gaps:18/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KTV---SVLKHRKRRILQDESVVTQKRN-DRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRIK 74
            |||   ||||.|||   ::|..:.:|:. :..||:.|.|....|.||:.:...|.:.||...::|
plant     7 KTVVPESVLKKRKR---EEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

  Fly    75 QTILRTNVTEQSAKAA--DDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKEN 137
            :        |...|..  .|...||||::|..|....|..|..|.:.||:....|.||::..|..
plant    69 R--------EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT 125

  Fly   138 QLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
            ..:||.:||:|.||.|:|.|::||::|:||.:::.::||:..|::|:|.||..|:||:||:||||
plant   126 INMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEI 190

  Fly   203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
            .||||:|...|.||..|.|.:|..|.:||.: .|..||:.|:|...||||:.|
plant   191 MTVGPHFKEANNFLWPFQLKAPLGGMKKKRN-HYVEGGDAGNRENFINELVRR 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7-likeNP_609543.2 uL30_euk 18..257 CDD:273548 92/241 (38%)
AT3G13580NP_187967.1 uL30_euk 12..244 CDD:273548 93/243 (38%)

Return to query results.
Submit another query.