DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr81 and daw1

DIOPT Version :9

Sequence 1:NP_609535.1 Gene:Wdr81 / 34616 FlyBaseID:FBgn0032395 Length:1953 Species:Drosophila melanogaster
Sequence 2:NP_989349.1 Gene:daw1 / 394975 XenbaseID:XB-GENE-5802528 Length:415 Species:Xenopus tropicalis


Alignment Length:225 Identity:50/225 - (22%)
Similarity:79/225 - (35%) Gaps:64/225 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1651 LQSFVGHTNSVRAIYALDNENSF----ISASKDKTVKLWSLRSEGDGRKTSACQFTYTAHKKSIN 1711
            |.:..||.|   .:||:...|.:    .:.|.|||.||||       .:|..|..|:..|...|.
 Frog   127 LHTLEGHRN---VVYAIQFNNPYGDKIATGSFDKTCKLWS-------AETGKCYHTFRGHTAEIV 181

  Fly  1712 SLGF--LESLRYVVSCDSGIHLWDPFIGRPLSVLDAPRHSAVTVVKCLPSHSPLVIAGTAESTVK 1774
            .|.|  ..:|....|.|:...|||...|.....|..  |:|..:.....:....:|.|:.:.||.
 Frog   182 CLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSG--HAAEIISLSFNTTGDRLITGSFDHTVS 244

  Fly  1775 MVDARSCEYVNEWRVCNASLPNATVRCLAVAPSGNWLAAGLSSGCIVQLDTRTGMVINSWRPMEC 1839
            :           |.:                |||.         .|..|....|.:.::....:|
 Frog   245 V-----------WEI----------------PSGR---------RIHTLIGHRGEISSAQFNWDC 273

  Fly  1840 DLLQLAAPSDQFLVSSALDHSLAVWHALDG 1869
            .|          :.::::|.|..:|.:|:|
 Frog   274 SL----------IATASMDKSCKLWDSLNG 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr81NP_609535.1 Beach 345..588 CDD:100117
WD40 <1644..1877 CDD:225201 50/225 (22%)
WD40 1651..1876 CDD:295369 50/225 (22%)
WD40 repeat 1662..1705 CDD:293791 14/46 (30%)
WD40 repeat 1710..1744 CDD:293791 10/35 (29%)
WD40 repeat 1752..1788 CDD:293791 4/35 (11%)
WD40 repeat 1799..1836 CDD:293791 6/36 (17%)
daw1NP_989349.1 CEP19 4..>81 CDD:317357
WD40 84..373 CDD:238121 50/225 (22%)
WD 1 90..129 1/1 (100%)
WD40 repeat 96..132 CDD:293791 1/4 (25%)
WD 2 132..174 17/51 (33%)
WD40 repeat 137..175 CDD:293791 14/44 (32%)
WD 3 175..214 11/38 (29%)
WD40 repeat 181..217 CDD:293791 10/35 (29%)
WD 4 217..256 11/76 (14%)
WD40 repeat 222..258 CDD:293791 9/71 (13%)
WD 5 259..298 8/45 (18%)
WD40 repeat 265..300 CDD:293791 7/39 (18%)
WD 6 301..340
WD40 repeat 306..342 CDD:293791
WD 7 343..384
WD40 repeat 348..384 CDD:293791
WD40 376..414 CDD:197651
WD 8 386..415
WD40 repeat 390..414 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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