DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or33a and Or88a

DIOPT Version :10

Sequence 1:NP_523553.1 Gene:Or33a / 34601 FlyBaseID:FBgn0026392 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:405 Identity:80/405 - (19%)
Similarity:151/405 - (37%) Gaps:85/405 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 WRLLGVEGDYPFRRLVDFTITSFITILF--------PVHLILG--MYKKPQIQVFRSLHFTSECL 74
            ||...|:.......:|.|.:::|:.:||        ..|..||  ..:.|.:        .|..:
  Fly    32 WRRNPVDNSMVNASMVPFCLSAFLNVLFFGCNGWDIIGHFWLGHPANQNPPV--------LSITI 88

  Fly    75 FCSYKFFCFRWKLKEI---------KTIEGLLQDLDSRVESEEERNYFNQNPSRVARMLSKSYLV 130
            :.|.:......|.|||         :....|:..||.::: |..||::.:  .|..|:.  |:|.
  Fly    89 YFSIRGLMLYLKRKEIVEFVNDLDRECPRDLVSQLDMQMD-ETYRNFWQR--YRFIRIY--SHLG 148

  Fly   131 AAISAIITATVAGLFSTGRNL-------MYLGWFPYDFQATAAIYWISFSYQAI----GSSLLI- 183
            ..:..::...:..|...|::.       :..||.|...:.....|.:.:|:..:    |.|..: 
  Fly   149 GPMFCVVPLALFLLTHEGKDTPVAQHEQLLGGWLPCGVRKDPNFYLLVWSFDLMCTTCGVSFFVT 213

  Fly   184 LENLANDSYPPITFCVVSGHVRLLIMRLSRIGHDVKLSSSENTRKLIEGIQDHRKLMKIIRLLRS 248
            .:||.|         |:.||   |:|.|   ||..:..|:.:.|   :.:.|.::....:|||..
  Fly   214 FDNLFN---------VMQGH---LVMHL---GHLARQFSAIDPR---QSLTDEKRFFVDLRLLVQ 260

  Fly   249 TLHLSQ---------------LGQFLSSGINISITLINILFFAENNFAMLYYAVFFAAMLIEL-- 296
            ...|..               :..|:.:|     :|...||.......:|..|.:....|:.:  
  Fly   261 RQQLLNGLCRKYNDIFKVAFLVSNFVGAG-----SLCFYLFMLSETSDVLIIAQYILPTLVLVGF 320

  Fly   297 -FPSCYYGILMTMEFDKLPYAIFSSNWLKMDKRYNRSLIILMQLTLVPVNIKAGGIVGIDMSAFF 360
             |..|..|..:....:.|..::.|..|....:||.:..::..|.......:.|.|::.::|..|.
  Fly   321 TFEICLRGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFT 385

  Fly   361 ATVRMAYSFYTLALS 375
            ..:::||..:|...|
  Fly   386 EIMQLAYRLFTFLKS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or33aNP_523553.1 7tm_6 61..367 CDD:251636 64/344 (19%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 65/352 (18%)

Return to query results.
Submit another query.