DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment esc and eed

DIOPT Version :10

Sequence 1:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001017325.1 Gene:eed / 550079 XenbaseID:XB-GENE-491480 Length:438 Species:Xenopus tropicalis


Alignment Length:422 Identity:218/422 - (51%)
Similarity:295/422 - (69%) Gaps:8/422 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSDKVKNGNEPEESEESCGDESASYTTNSTTSRSKSPSSSTRSKRR---GRRSTKSKPKSRAAY 62
            :|||:..|   ||.|.:. .|::.|..:.:.|.|..:|:::..:..|   |:...||| |.:.::
 Frog    20 LSSDENSN---PELSGDE-NDDTVSIESGTNTERPDTPTNAANAPGRKGWGKGKWKSK-KCKYSF 79

  Fly    63 KYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVF 127
            |....:||:|...:|||.||....:.:|.||||.||||||:|||..||.::||..|.|.|.||.|
 Frog    80 KCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHPQGEIRLLQSYVDADADENF 144

  Fly   128 YTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKD 192
            |||||:||..||.||||.||.||:||:|:....:.:.:|:|||.|||||||||....||||.|||
 Frog   145 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD 209

  Fly   193 HAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCLNTPEFHHKIELS 257
            ||:||||||:...:||.||||||||||||.|:::.|::|:|.|||||||||.:|:......|..|
 Frog   210 HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSLRMKTAIRES 274

  Fly   258 NTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKPGQLHQSFEQ 322
            ..::..|:..||.:...||||||||||||||||||:|.|:.:|||||||||||||||::....::
 Frog   275 YEYNPNKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDK 339

  Fly   323 VKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWELDPSDPEGAHMTTLHNS 387
            :|.|:|:.||:..|:|.:|:||::||..:.|||::|||||.||:|||:|:..||..|..|||...
 Frog   340 IKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYP 404

  Fly   388 RSVATVRQIAFSRDASVLVYVCDDATVWRWNR 419
            :..:.:||.:||||:|:||.||||||:|||:|
 Frog   405 KCASAIRQTSFSRDSSILVAVCDDATIWRWDR 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
escNP_477431.1 WD40 72..420 CDD:441893 197/348 (57%)
WD40 repeat 76..122 CDD:293791 25/45 (56%)
WD40 repeat 128..168 CDD:293791 21/39 (54%)
WD40 repeat 173..210 CDD:293791 25/36 (69%)
WD40 repeat 220..282 CDD:293791 27/61 (44%)
WD40 repeat 289..337 CDD:293791 26/47 (55%)
WD40 repeat 345..386 CDD:293791 22/40 (55%)
WD40 repeat 393..417 CDD:293791 16/23 (70%)
eedNP_001017325.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 14/53 (26%)
WD 1 88..131 22/42 (52%)
WD40 repeat 93..137 CDD:293791 24/43 (56%)
WD40 <106..436 CDD:441893 190/329 (58%)
WD 2 139..182 24/42 (57%)
WD40 repeat 145..185 CDD:293791 21/39 (54%)
WD 3 185..225 27/39 (69%)
WD40 repeat 190..227 CDD:293791 25/36 (69%)
WD 4 231..270 22/38 (58%)
WD40 repeat 237..299 CDD:293791 27/61 (44%)
WD 5 301..338 26/36 (72%)
WD40 repeat 306..354 CDD:293791 26/47 (55%)
WD 6 356..396 21/39 (54%)
WD40 repeat 362..402 CDD:293791 21/39 (54%)
WD 7 405..438 19/32 (59%)
WD40 repeat 410..434 CDD:293791 16/23 (70%)

Return to query results.
Submit another query.