DRSC/TRiP Functional Genomics Resources

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Protein Alignment esc and lrwd1

DIOPT Version :10

Sequence 1:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_683313.4 Gene:lrwd1 / 327124 ZFINID:ZDB-GENE-030131-5335 Length:768 Species:Danio rerio


Alignment Length:468 Identity:102/468 - (21%)
Similarity:180/468 - (38%) Gaps:132/468 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KVKNGNEPEESE------ESCGDESASYT--------TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55
            ::.:...||.|.      |:...::||.|        :..|:.::|..|...:||:...:..||.
Zfish   301 RLTSAETPESSPRKSSRLENVTQKAASQTESPRKPGMSTPTSKQAKCESPRKQSKQSTAKMEKST 365

  Fly    56 PKSRAAYKYDT----------HVKENH---------GANIFGVAFNTLLGKDEP----------- 90
            |:.....|...          ||.:.|         ...::..||       ||           
Zfish   366 PRKTTKAKLQVPQEPVSLTPLHVLQCHSRQNDPDDFSTQLWACAF-------EPQQDDSIDISGG 423

  Fly    91 -QVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSS-------PLLAAAG 147
             |..||.|...:.|..|  :.|: :|..|..|..|  |::.|||..|.:.:       .:|||.|
Zfish   424 SQTIATCGGETLCVINC--ESGL-VLKKYKVPGED--FFSLAWSTVLMSRTGGSARPCNILAAGG 483

  Fly   148 YRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGV 212
            .||.:::|....|.|.|.:....:||:.::|:|.|...|.:|:.|..|.||:|         || 
Zfish   484 KRGCVKLIHPRVNLAFGEFRVSRRAISIMRFNPRKPTFLFTGTYDKKIFLWDI---------GG- 538

  Fly   213 EGHRDEVLSIDFNMRGDRIVS----------------------SGMDHSLKLWCLNTPEFHHKIE 255
                   |..|:|.:..::::                      ||.|..  |:|.:       ::
Zfish   539 -------LDQDYNFKISKLLTLETSSTPLHLALLPSSPDTHLLSGCDEG--LYCFD-------VQ 587

  Fly   256 LS-NTFSQEKSTLPFPTVTKHFPDFSTRDIHRNY--VDCVQWFG-NFVLSKS-CENAIVCWKPGQ 315
            || ||..:.:.      :...||.:...|...||  :|.:.:.. :.|.||| .:.:|..|....
Zfish   588 LSKNTLKRNEE------IEIVFPIYKKNDKKNNYRTIDGLSFLSDDVVASKSHMQGSIYLWSWSA 646

  Fly   316 LHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWELDPSDPEGAH 380
            ...|:...| .:....|:||.::...:|.::..|..|....:..|::||:::::.:..       
Zfish   647 TRASWNSRK-KEVPAVILAELQWSSTDIPYLSLGTCPGYGYVVCGDEQGRLWMYHITD------- 703

  Fly   381 MTTLHNSRSVATV 393
             |.:.|.:|..|:
Zfish   704 -TMMENFKSGKTI 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
escNP_477431.1 WD40 72..420 CDD:441893 84/377 (22%)
WD40 repeat 76..122 CDD:293791 13/57 (23%)
WD40 repeat 128..168 CDD:293791 14/46 (30%)
WD40 repeat 173..210 CDD:293791 11/36 (31%)
WD40 repeat 220..282 CDD:293791 14/84 (17%)
WD40 repeat 289..337 CDD:293791 12/49 (24%)
WD40 repeat 345..386 CDD:293791 6/40 (15%)
WD40 repeat 393..417 CDD:293791 0/1 (0%)
lrwd1XP_683313.4 LRR <24..>106 CDD:443914
leucine-rich repeat 28..53 CDD:275378
leucine-rich repeat 54..75 CDD:275378
leucine-rich repeat 76..97 CDD:275378
WD40 <399..>587 CDD:441893 52/225 (23%)
WD40 repeat 509..552 CDD:293791 16/59 (27%)
WD40 repeat 560..609 CDD:293791 11/63 (17%)
WD40 repeat 618..667 CDD:293791 12/49 (24%)
WD40 repeat 675..716 CDD:293791 9/49 (18%)
WD40 repeat 739..763 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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