DRSC/TRiP Functional Genomics Resources

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Protein Alignment esc and lrwd1

DIOPT Version :10

Sequence 1:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_031751539.1 Gene:lrwd1 / 100145159 XenbaseID:XB-GENE-959481 Length:726 Species:Xenopus tropicalis


Alignment Length:401 Identity:84/401 - (20%)
Similarity:154/401 - (38%) Gaps:79/401 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ESASYTTNSTTSRSKSPSSSTRSKRRGRRSTKSKPKSRAAYKYD---------------THVKEN 71
            |:::..|.|.::.:|||..:.:|....::|.:|..|.....|..               .|..:.
 Frog   289 ETSTQGTPSKSTETKSPKVALKSTPSKKQSNESSAKINGKQKLSLTPKIIQKALDNIEPLHFLQC 353

  Fly    72 HGAN---------IFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVF 127
            |..|         ::..||..:|....|:..||.|.:.|.:.:|.....|:....     ..|.|
 Frog   354 HSKNNSCEDFKTQLWACAFEPILDSSSPKAVATCGGDSVCIIDCETGKVMKKYKV-----TGEEF 413

  Fly   128 YTCAWSY-------DLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQL 185
            :|..|:.       :.|....:|||.|..||:|:|..:.:...|....|.:||:.:.|.|.:...
 Frog   414 FTLVWTTLTMIGKDEQKRKINVLAAGGKHGVVRIIHAKVSLCYGEIKAHKKAISIMCFSPKQDTF 478

  Fly   186 LLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCL--NTP 248
            |.:||.|..|.||:|....|                 |:|.|..::::..........||  :.|
 Frog   479 LFTGSYDKRIILWDIGVPDC-----------------DYNFRPSQLLTLDTTSVPLRMCLVPSCP 526

  Fly   249 E-----------FHHKIELSNTFSQE--KSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFG-NFV 299
            :           |...|.|.....:.  :..|.||...:...|   .|.|  .:|.:.:.. :.:
 Frog   527 DEFLVAACEDGCFAWDIRLDKKQGRRSYEVELNFPIYKEERKD---NDFH--VIDSLAFLNEDII 586

  Fly   300 LSKSCENAIV---CWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGN 361
            .|||.....:   .|:.....:..:.||..|:  .|:|:.::...|..::....:|.:..:..|:
 Frog   587 ASKSVMQGSIYLWSWEKTLKTRKTKNVKKLDA--VILAQMKWSSSETPYLVLSTSPERYCVFCGD 649

  Fly   362 QQGKVYVWELD 372
            :.||:::::||
 Frog   650 EDGKIWIYDLD 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
escNP_477431.1 WD40 72..420 CDD:441893 72/336 (21%)
WD40 repeat 76..122 CDD:293791 10/45 (22%)
WD40 repeat 128..168 CDD:293791 12/46 (26%)
WD40 repeat 173..210 CDD:293791 12/36 (33%)
WD40 repeat 220..282 CDD:293791 13/76 (17%)
WD40 repeat 289..337 CDD:293791 10/51 (20%)
WD40 repeat 345..386 CDD:293791 6/28 (21%)
WD40 repeat 393..417 CDD:293791
lrwd1XP_031751539.1 LRR <14..>101 CDD:443914
leucine-rich repeat 23..48 CDD:275380
leucine-rich repeat 49..70 CDD:275380
leucine-rich repeat 71..92 CDD:275380
leucine-rich repeat 93..118 CDD:275380
WD40 368..724 CDD:475233 70/322 (22%)
WD40 repeat 466..503 CDD:293791 14/53 (26%)
WD40 repeat 513..566 CDD:293791 9/52 (17%)
WD40 repeat 575..612 CDD:293791 5/36 (14%)
WD40 repeat 633..676 CDD:293791 6/28 (21%)
WD40 repeat 681..723 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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