DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and pde2a

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_031751996.1 Gene:pde2a / 780063 XenbaseID:XB-GENE-5945995 Length:964 Species:Xenopus tropicalis


Alignment Length:317 Identity:95/317 - (29%)
Similarity:158/317 - (49%) Gaps:30/317 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 LFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRN-PYHNNLHAVDVMQTIHYCLC---NTGLMNW 832
            :|...|.::.:||....|..|...|::|   ||: ||||.:||..|.   |:|..   |..|:|:
 Frog   638 MFEDMGFVNNYKIDRTTLIRFCLMVKKG---YRDPPYHNWMHAFSVS---HFCYLLFKNLELVNY 696

  Fly   833 LTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLY-NDRAVLENHHASASFRLLREDEYNI 896
            |..:||||..::.|.||.:|.||.|:|.|.|.|..|.|| ::.:|:|.||.:.:..:|.....||
 Frog   697 LEYIEIFALFVSCLCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNSQGCNI 761

  Fly   897 LSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK------VLSLVLHCC 955
            |...||::::.:..|:.:::|.||:.:|   ::..::|..:.:...|.|.      ::.|::...
 Frog   762 LEQFSRKDYQRMLDLMRDIILATDLAHH---LRIFKELTRMSQDGFDPQNKHHHYLLICLLMTSS 823

  Fly   956 DISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMG 1020
            |:|...|.|....:...|:.:|||.||||||.:|...|.:.||....:.|.||.|::.|..|...
 Frog   824 DLSDQTKGWKTTRKIAELIYKEFFSQGDLEKAMGNRPSEMMDREKAYIPELQISFMEHIAMPIYN 888

  Fly  1021 VMSDML--ELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITPSMDKPRD 1075
            ::.|:.  ...|......|:.| .|.|.|:.|...       :|::.....:|:..|
 Frog   889 LLKDLFPRSAELYERVATNREK-WTRVSHKFTIRG-------LPSNNSLDFLDEEYD 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497
PDEase_I 807..1027 CDD:459723 74/231 (32%)
pde2aXP_031751996.1 GAF 255..401 CDD:214500
GAF 423..574 CDD:214500
PDEase_I 671..904 CDD:459723 75/238 (32%)
Blue background indicates that the domain is not in the aligned region.

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