DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and pde4a

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_009298019.1 Gene:pde4a / 572061 ZFINID:ZDB-GENE-131125-7 Length:777 Species:Danio rerio


Alignment Length:766 Identity:205/766 - (26%)
Similarity:340/766 - (44%) Gaps:142/766 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 YEDMQRNLHYAARVLEAVFIDES-REGCNGNCKNLNCSRHS-----HGRDDQQQDNNNSN----- 506
            |.|..|  |:..::..:..:|.| |.|       |..||.|     ||.......|...|     
Zfish    47 YSDTDR--HHHRQIERSNAMDTSDRPG-------LKKSRMSWPSSFHGTTSASMSNCAGNKRYDG 102

  Fly   507 -------RSCSLQEASPGGAGAGVTPGADNQDSIESRT-KGVSQAPQTHSGPTGPPSNTSSE-TI 562
                   ||....:||||.......|.:..::|...|: .....:|:|.|..:...|...:| .|
Zfish   103 ENGPSPGRSPMDSQASPGLVLHPSFPQSQRRESFLYRSDSDYDMSPKTMSRNSSINSEGHAEDLI 167

  Fly   563 AQPAPKLQPALETVRE--SVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATAEPSAKAAESQ 625
            ..|..::..:|.|||.  :::..              .:|.|.|.::..:|..|..|:..:.|:.
Zfish   168 VTPFAQVLASLRTVRSNFTILAN--------------VTTPTTTMRSPVTSQPTVPPATLSDETY 218

  Fly   626 AGSAGSS----GSCSNPAAVHRQRRLRTPTWARSMSTNKTR--LADEDDELSEVQPDAVPPEVRE 684
            ...|..:    ..|     :.:...::|......|::||.:  |..|...|||:....  .:|.|
Zfish   219 QQLARETLEELDWC-----LDQLETIQTHRSVSEMASNKFKRMLNRELSHLSEMSRSG--NQVSE 276

  Fly   685 WLASTFTR-----QMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALT--AFP------ 736
            ::::||..     ::.:...:..|||    ::|       :..:.:...||:||  |.|      
Zfish   277 YISTTFLDKQNEVEIPSPTLREREKP----MSH-------ISGVKKLTHSSSLTSAALPRFGVKT 330

  Fly   737 ---PDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEE 798
               ..:.|.|.:|:.|..::|.:.|.::.:.:..:.:.:|.....:..|:|.......::..:|:
Zfish   331 EQEDALARELNDLNKWGLNIFHVAEFSNNRPLSCIMFAIFQERDLLKTFRIPVDTFITYVMTLED 395

  Fly   799 GYCRYRN-PYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVM 862
            .|  :.| .|||:|||.||.|:.|..|....|....:||||.|:|.||.:||.:|.|.:|.|.:.
Zfish   396 HY--HANVAYHNSLHAADVTQSTHVLLSTPALDAVFSDLEILAALFAAAIHDVDHPGVSNQFLIN 458

  Fly   863 SGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQ 927
            :.||.||:|||.:||||||.:..|:||.|:..:|..:|::.:.:.||.|||:|||.|||:.|...
Zfish   459 TNSELALMYNDESVLENHHLAVGFKLLHEENCDIFQNLTKRQRQSLRKLVIDMVLATDMSKHMSL 523

  Fly   928 MKAMRQLLTLQEATI----------DKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQG 982
            :..::.::..::.|.          |:.:||..::||.|:|:|.|...|:.:||..::||||:||
Zfish   524 LADLKTMVETKKVTSSGVLMLDHYNDRIQVLRNMVHCADLSNPTKPLAVYRQWTERIMEEFFQQG 588

  Fly   983 DLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEH 1047
            |.|:|.|:..||:||::...|.:||:.|||:||.|......|:       :.|..:....||.::
Zfish   589 DKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWGDL-------VHPDAQEILDTLEDN 646

  Fly  1048 ETTANSTTNSAIVIPNSGITPSMDKPRDHRTEA---KTTAAECLARKSVTGTTASKFNIPKPWLT 1109
            .....||      ||.|. :|..|:| |:..|:   |......|..::|.....|..:|.     
Zfish   647 RDWYQST------IPQSP-SPPPDRP-DNELESCRNKFQFELTLEGETVQDGPPSHNHIV----- 698

  Fly  1110 CLVENKRIWKEQAVKDAEARALATAAEEAAAAAAAEAEESKPETETADGEQ 1160
                   |..:...||.|              .|.||||.:.|.:..|||:
Zfish   699 -------IHDQDEKKDDE--------------EAEEAEEDEAEEKMEDGEE 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 13/66 (20%)
PDEase_I 807..1027 CDD:459723 94/229 (41%)
pde4aXP_009298019.1 PDE4_UCR 168..284 CDD:465648 27/136 (20%)
PDEase_I 403..643 CDD:459723 95/246 (39%)

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