DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and si:dkey-219c10.4

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_017213373.2 Gene:si:dkey-219c10.4 / 562357 ZFINID:ZDB-GENE-081105-151 Length:529 Species:Danio rerio


Alignment Length:434 Identity:124/434 - (28%)
Similarity:189/434 - (43%) Gaps:83/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 RRKSDEKPKFRSVAHAIRAGIFVD--------------RMYRR------------VSSSALTAFP 736
            |:....:.|..||.|....|:|.|              |..|:            :..|:|.. .
Zfish   125 RQVESFREKLESVEHLSWLGLFKDMSEGTHKPSPFYHKRTLRKTREECEHVREKFLQMSSLEV-S 188

  Fly   737 PDVVRLLK--NLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEG 799
            .:|.:.||  ..|:|.:      |.|...|:..|.|   .....|..|.|.|.:|:.||:.|   
Zfish   189 EEVRQYLKTPTFDNWQW------EDAEIMVLLQVMY---TDLDFISTFNIEPDVLQQFLYEV--- 241

  Fly   800 YCRYRN-PYHNNLHAVDVMQTIHYCLCNTGLMN---WLTDL-------EIFASLLAALLHDYEHT 853
            |.||.| |:||..|          |.|.|.:|.   |||||       ::...|.:|:.||.:||
Zfish   242 YRRYNNIPFHNFKH----------CFCVTQMMYGLIWLTDLRSKIDSIDLLIMLTSAVCHDLDHT 296

  Fly   854 GTTNNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLG 918
            |..|.:.:.:.:|.||.|||.:.|||||.:.:|.:|.:.|.||..:|..|:::.:|..:|:.:|.
Zfish   297 GYNNAYQINARTELALRYNDISPLENHHCAVAFEILEKTESNIFRNLPTEQYKRIREGIIKCILA 361

  Fly   919 TDMTNHFQQMKAMRQLLTLQE-ATIDKQKVLSLV-LHCCDISHPAKQWGVHHRWTMLLLEEFFRQ 981
            |||:.|...:...:.:|.:.: ...|.:.||.:: :...|||:.|:...|...|...||:|||.|
Zfish   362 TDMSRHTDILNKFKAILPVFDFGNKDHRDVLMMIMIKVSDISNEARPMDVAEPWLDCLLQEFFNQ 426

  Fly   982 GDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAPIA-PMNKS------ 1039
            .|:||..|||.:|..||:......||..||.|::.|....::::...:...|. |:.|:      
Zfish   427 SDMEKLEGLPVTPFMDRDKVTKPSSQTGFIRFVLFPLFIELANLFPCLEQHIIDPVRKALDYYTE 491

  Fly  1040 --KPATLVEHETTANSTTNSAIVIPNSGITPSMDKPRDHRTEAK 1081
              |.....:.....|.||          :..|..|..|...|||
Zfish   492 MEKALEREKQNRALNETT----------VKTSTSKEPDANLEAK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 8/37 (22%)
PDEase_I 807..1027 CDD:459723 76/231 (33%)
si:dkey-219c10.4XP_017213373.2 PDEase_I 250..478 CDD:459723 76/237 (32%)

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