DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and PDE6C

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_006195.3 Gene:PDE6C / 5146 HGNCID:8787 Length:858 Species:Homo sapiens


Alignment Length:805 Identity:172/805 - (21%)
Similarity:294/805 - (36%) Gaps:215/805 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 NLSQTEMVVGRD-SADYTAMHSINVGVGNSFLRGDTDIPQESGHSFETPSNMSFTAGQWDTESLP 424
            ||..|.:|||:: .|...|::.:|   .:.|.:.|.::..:..:.......:..|:..::.||. 
Human   178 NLLATPIVVGKEVLAVIMAVNKVN---ASEFSKQDEEVFSKYLNFVSIILRLHHTSYMYNIESR- 238

  Fly   425 PVDTPDALNKAAGRIRSLLRRMDHETVAYE--DMQRNLHYAARVLEAVFIDESREGCNGNCKNLN 487
                           ||.:.......|..|  |::|..|.|...:.:.               ||
Human   239 ---------------RSQILMWSANKVFEELTDVERQFHKALYTVRSY---------------LN 273

  Fly   488 CSRHSHGRDDQQQDNNNSNR-SCSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAPQTHSGPT 551
            |.|:|.|..|..::....:. ...|.|..|                              :.||.
Human   274 CERYSIGLLDMTKEKEFYDEWPIKLGEVEP------------------------------YKGPK 308

  Fly   552 GPPSNTSSETIAQPAPKLQPALETVRESVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATA- 615
            .|...             :.....:.:.::.   .|:.....|.|||...||.|...|..:... 
Human   309 TPDGR-------------EVNFYKIIDYILH---GKEEIKVIPTPPADHWTLISGLPTYVAENGF 357

  Fly   616 ------EPSAKAAESQAGSAGSSG-----SCSNPAAVHRQRRLRTPTWARSMSTNKTRLADEDDE 669
                  .|:.:....|.|....:|     ..|.|....::..:...|:   .:....:..||.| 
Human   358 ICNMMNAPADEYFTFQKGPVDETGWVIKNVLSLPIVNKKEDIVGVATF---YNRKDGKPFDEHD- 418

  Fly   670 LSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTA 734
                          |::..|.|:.:..|...:|...|...:.:  |..|..:.:..:..     |
Human   419 --------------EYITETLTQFLGWSLLNTDTYDKMNKLEN--RKDIAQEMLMNQTK-----A 462

  Fly   735 FPPDVVRLLK-----NLD---------------------------DWTFDVFALTEAASGQVVKY 767
            .|.::..:||     |:|                           ::.|..|.|||..   ::| 
Human   463 TPEEIKSILKFQEKLNVDVIDDCEEKQLVAILKEDLPDPRSAELYEFRFSDFPLTEHG---LIK- 523

  Fly   768 VAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNW 832
            ....||.....:.|||:...:|..:::.|.:||...  .|||..|..:|.||:...|....|..:
Human   524 CGIRLFFEINVVEKFKVPVEVLTRWMYTVRKGYRAV--TYHNWRHGFNVGQTMFTLLMTGRLKKY 586

  Fly   833 LTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNIL 897
            .||||.||.|.||..||.:|.||.|.:.:.|.|..|.|:.. ::||.||...|..||:::..||.
Human   587 YTDLEAFAMLAAAFCHDIDHRGTNNLYQMKSTSPLARLHGS-SILERHHLEYSKTLLQDESLNIF 650

  Fly   898 SHLSREEFRELRGLVIEMVLGTDMTNHFQQ-------MKAMRQLLTLQEA----TID---KQKVL 948
            .:|::.:|..:..|....::.||:..:|::       :.|..|:.|.:||    |:|   |:.::
Human   651 QNLNKRQFETVIHLFEVAIIATDLALYFKKRTMFQKIVDACEQMQTEEEAIKYVTVDPTKKEIIM 715

  Fly   949 SLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKEL--GLPFSPLCDRN-NTLVAESQICF 1010
            ::::..||:|...|.|.|..:..:::..||:.|||||:.:  ..|. |:.||| ...:.:.|:.|
Human   716 AMMMTACDLSAITKPWEVQSQVALMVANEFWEQGDLERTVLQQQPI-PMMDRNKRDELPKLQVGF 779

  Fly  1011 IDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITPSMDKPRD 1075
            |||:                           .|.|..|.:..          :..|||.:...::
Human   780 IDFV---------------------------CTFVYKEFSRF----------HKEITPMLSGLQN 807

  Fly  1076 HRTEAKTTAAECLARKSVTGTTASK 1100
            :|.|.|:.|.|..|:..|....|.|
Human   808 NRVEWKSLADEYDAKMKVIEEEAKK 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 11/59 (19%)
PDEase_I 807..1027 CDD:459723 74/236 (31%)
PDE6CNP_006195.3 GAF 80..231 CDD:214500 12/55 (22%)
GAF 256..443 CDD:214500 42/265 (16%)
PDEase_I 561..805 CDD:459723 80/282 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 830..858 2/3 (67%)

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