DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and PDE6A

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_000431.2 Gene:PDE6A / 5145 HGNCID:8785 Length:860 Species:Homo sapiens


Alignment Length:459 Identity:111/459 - (24%)
Similarity:183/459 - (39%) Gaps:116/459 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   732 LTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRV 796
            |.|..||..:.  .::.:.|....|||.   ::|| ...:::.....:.||.|....|..|::.:
Human   491 LQAELPDADKY--EINKFHFSDLPLTEL---ELVK-CGIQMYYELKVVDKFHIPQEALVRFMYSL 549

  Fly   797 EEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHV 861
            .:||.:.  .|||..|..:|.||:...|....|..:.||||..|.:.||..||.:|.||.|.:.:
Human   550 SKGYRKI--TYHNWRHGFNVGQTMFSLLVTGKLKRYFTDLEALAMVTAAFCHDIDHRGTNNLYQM 612

  Fly   862 MSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQ 926
            .|.:..|.|:.. ::||.||......|||::..||..:|:|.:......::...::.||:..:|:
Human   613 KSQNPLAKLHGS-SILERHHLEFGKTLLRDESLNIFQNLNRRQHEHAIHMMDIAIIATDLALYFK 676

  Fly   927 QMKAMRQLLTLQEATID---------------KQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLE 976
            : :.|.|.:..|..|.:               |:.|:::::..||:|...|.|.|..:..:|:..
Human   677 K-RTMFQKIVDQSKTYESEQEWTQYMMLEQTRKEIVMAMMMTACDLSAITKPWEVQSQVALLVAA 740

  Fly   977 EFFRQGDLEKEL--GLPFSPLCDRNNT-LVAESQICFIDFIVEPSMGVMSDMLELILAPIAPMNK 1038
            ||:.|||||:.:  ..|. |:.|||.. .:.:.|:.||||:                        
Human   741 EFWEQGDLERTVLQQNPI-PMMDRNKADELPKLQVGFIDFV------------------------ 780

  Fly  1039 SKPATLVEHETTANSTTNSAIVIPNSGITPSMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNI 1103
               .|.|..|.:..          :..|||.:|...::|.|.|..|.|..|:..           
Human   781 ---CTFVYKEFSRF----------HEEITPMLDGITNNRKEWKALADEYDAKMK----------- 821

  Fly  1104 PKPWLTCLVENKRIWKEQAVKDAEARALATAAEEAAAAAAAEAEESKPETETADGEQSEPAAEPA 1168
                    |:.::..|:|:.|.|.|                             |.|  |...|:
Human   822 --------VQEEKKQKQQSAKSAAA-----------------------------GNQ--PGGNPS 847

  Fly  1169 DGAA 1172
            .|.|
Human   848 PGGA 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497
PDEase_I 807..1027 CDD:459723 69/237 (29%)
PDE6ANP_000431.2 GAF 75..232 CDD:214500
GAF 254..441 CDD:214500
PDEase_I 558..802 CDD:459723 76/283 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 821..860 12/81 (15%)
Blue background indicates that the domain is not in the aligned region.

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