DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde1c and LOC1276218

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_061508412.1 Gene:LOC1276218 / 1276218 VectorBaseID:AGAMI1_011053 Length:1033 Species:Anopheles gambiae


Alignment Length:454 Identity:134/454 - (29%)
Similarity:208/454 - (45%) Gaps:64/454 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 PPPASTSTLTSQTTTSSS-----ATAEPSAKAAESQAGSAGSSGSCSNPAAVHRQRRLRTPTWAR 654
            ||.......|.:||.|||     :|...:|..|                ||......|:|||   
Mosquito    48 PPDQIADVATVETTDSSSYKRLISTTSSNAPTA----------------AATTTIVALQTPT--- 93

  Fly   655 SMSTNKTRLADEDDELSEVQPDAVPPEVREWLASTFTRQMATSRR------KSDEKPKFRSVAHA 713
             .:|....|...|||:.|       .:.|..|.....|:::...|      .::|:.:.....||
Mosquito    94 -ATTPTVMLLHGDDEMEE-------DDARRALNGAAVRRISEQDRPLFEALMAEERGELPRRRHA 150

  Fly   714 IRAGIFVDRMYRRVSSSALT-------AFPPDVVR-----LLKNLDDWTFDVFALTEAASGQVVK 766
            . .|.|: .|::|.....||       |...||:.     :|..::.|.|:.|.|.....|:.:.
Mosquito   151 C-TGRFL-TMHKRRRKKLLTRSLALDQAILDDVLHGQVQCILDRVNHWRFNAFTLETVTGGRSLP 213

  Fly   767 YVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMN 831
            .:...||:.||.:..|.:....:......:|||| ...|||||::||.||.|.:|..|....::.
Mosquito   214 VLCVHLFHWYGLLDHFNLDVVRVWKLFSLIEEGY-HSTNPYHNSIHATDVTQAMHCFLQEKRILE 277

  Fly   832 WLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNI 896
            .|:.|||.|||:.|:.||.:|.|....|.:.:.:..|.||.:.:||||||..::...|.|.  .:
Mosquito   278 NLSPLEIMASLIGAVTHDLDHPGVNQPFLIATSNHLAALYENTSVLENHHWRSAIGCLLES--GV 340

  Fly   897 LSHLSREEFR-ELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQEA-----TIDKQKVLSLVLHCC 955
            ...:  ::.| ||...:..::|.||:|...:.:...|..|: ::|     |..:..:|.:.|.|.
Mosquito   341 AEQV--QDIRPELERQISSLILATDITRQQEFIGRFRDYLS-RDALDMRDTTHRHFILQISLKCA 402

  Fly   956 DISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPSM 1019
            |||:|.:.|.:..:|:..:.||||||||.|::|.||.:.||||.:|.|.:.|..|..|:|.|.|
Mosquito   403 DISNPCRPWDISKKWSTKVCEEFFRQGDYERQLNLPVTSLCDRQSTTVPKIQTGFFKFVVTPLM 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 14/65 (22%)
PDEase_I 807..1027 CDD:459723 78/219 (36%)
LOC1276218XP_061508412.1 None

Return to query results.
Submit another query.