DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and pde1a

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001096444.1 Gene:pde1a / 100125056 XenbaseID:XB-GENE-949176 Length:538 Species:Xenopus tropicalis


Alignment Length:469 Identity:228/469 - (48%)
Similarity:320/469 - (68%) Gaps:14/469 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 RLADEDDELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRR 726
            ||.|.:||||::..|:||.|||:||||||||:|...:|:.:|||||||:.||::|||||:|||||
 Frog    73 RLLDTEDELSDIHTDSVPLEVRDWLASTFTRKMGMRKRRPEEKPKFRSIVHAVQAGIFVERMYRR 137

  Fly   727 VSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEA 791
            .|:.|...:|..|:..:|::|.|.|:||.|.||:....:|::.||||.||...::|||....|.:
 Frog   138 SSNIAGLTYPSSVIASMKDVDRWAFNVFTLNEASGEHALKFMVYELFTRYDLTNRFKIPVSNLVS 202

  Fly   792 FLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTT 856
            |:..:|.||.:|:|||||.:||.||.||:||.:.:||:|:|||:|||.|.:.||.:||:||||||
 Frog   203 FVEALEVGYSKYKNPYHNLVHAADVTQTVHYIILHTGIMHWLTELEILAMIFAAAIHDFEHTGTT 267

  Fly   857 NNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDM 921
            ||||:.:.|:.|:|||||:||||||.||::|::::||.||..:||::::|:||.|||||||.|||
 Frog   268 NNFHIQTRSDVAILYNDRSVLENHHVSAAYRIMQDDEMNIFINLSKDDWRDLRTLVIEMVLSTDM 332

  Fly   922 TNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEK 986
            :.||||:|.||..|...|. |||.|.:||:||..|||||||.|.:|.|||.||:||||||||.|.
 Frog   333 SGHFQQLKTMRSTLQQPEG-IDKAKAMSLILHAADISHPAKPWDMHLRWTNLLMEEFFRQGDKEA 396

  Fly   987 ELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEHETTA 1051
            .|||||||||||.:|:||:|||.||||||||:..:::|..|.|:.|           |:|....:
 Frog   397 ALGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTFTLLTDSTEKIVFP-----------LIEEAAKS 450

  Fly  1052 NSTTNSAIVIPNSGITPSMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNIPKPWLTCLVENKR 1116
            :::........||.:....|.||  :...:|:..:..:....:..|....:..|..:..:.:||.
 Frog   451 DNSVFDKSSQNNSEVVRGTDTPR--KPSVRTSQMDGSSPSEYSLATVDLHHFKKNLVEIIQQNKE 513

  Fly  1117 IWKEQAVKDAEARA 1130
            .|||.|.::...::
 Frog   514 RWKELAAQERNLKS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 37/59 (63%)
PDEase_I 807..1027 CDD:459723 136/219 (62%)
pde1aNP_001096444.1 PDEase_I_N 73..133 CDD:462497 37/59 (63%)
PDEase_I 218..443 CDD:459723 139/236 (59%)

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