DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycY and CYCP1;1

DIOPT Version :10

Sequence 1:NP_609519.1 Gene:CycY / 34593 FlyBaseID:FBgn0032378 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_191871.1 Gene:CYCP1;1 / 825487 AraportID:AT3G63120 Length:221 Species:Arabidopsis thaliana


Alignment Length:160 Identity:41/160 - (25%)
Similarity:72/160 - (45%) Gaps:14/160 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LTHDQ-----VPDN---YDTHNPEHRQIYKFVRTLFNAAQLTAECAIITLVYLERLLTYAELDVG 270
            |.||.     .||:   :|..:|....|..::..:|..:..:..|.:|..:|::..|......:.
plant    48 LNHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLK 112

  Fly   271 PCNWKRMVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAK 335
            |.|..|:::..::||:||:||:...|..|.:: ..:|..::|.||.:.|..|.|.:.|....:..
plant   113 PLNVHRLIITTVMLAAKVFDDRYFNNAYYARV-GGVTTRELNRLEMELLFTLDFKLQVDPQTFHT 176

  Fly   336 YYFDLRTLAEANELNFPTEPLSKE--RAQK 363
            :...|.   :.|...|..|...||  ||.|
plant   177 HCCQLE---KQNRDGFQIEWPIKEACRANK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycYNP_609519.1 CYCLIN_CCNY_like 228..324 CDD:410243 24/95 (25%)
CYCP1;1NP_191871.1 CYCLIN_AtCycU-like 61..185 CDD:410307 28/127 (22%)

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