DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycY and cnppd1

DIOPT Version :10

Sequence 1:NP_609519.1 Gene:CycY / 34593 FlyBaseID:FBgn0032378 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_956222.1 Gene:cnppd1 / 334868 ZFINID:ZDB-GENE-030131-6808 Length:427 Species:Danio rerio


Alignment Length:243 Identity:54/243 - (22%)
Similarity:89/243 - (36%) Gaps:90/243 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLF---------------------------- 241
            |:|||:....:..|    ..|..|||.|..:.||...                            
Zfish     5 DLFDERTFTFSDFQ----EFTFLPEHEQWSERVRKRLYYGLDSDSTLDALSCPMTDIAVELLQKS 65

  Fly   242 -----------NAAQLTAE-----CA-IITLVYLERLLTYAELDVGPCNWKRMVLGAILLASK-V 288
                       .||.:..|     || ::.|:|:|||.......:...:...:.|.::::||| :
Zfish    66 APSPIRKLHKKYAAHVAREACISPCAMMLALIYIERLRHRNTEYLQQISSSDLFLISMMVASKYL 130

  Fly   289 WD---DQAVWNVDYCQILKDITVEDMNELERQFLELLQFNI------------NVPSSVYAKY-- 336
            :|   ::.|:|.::....| :.|:.:|.||..||..:::|:            .|.||:..:.  
Zfish   131 YDEGEEEEVFNDEWGTAAK-LDVQTVNTLEMNFLNAIEWNLFTEPSDFFKVLSQVESSIAERQGM 194

  Fly   337 ------YFDLRTLAEANELNFPTEPLSKERAQKLEAMSRVMQ--DKVT 376
                  |.||..|.|  .||:            .||:|.:.|  .|||
Zfish   195 KRGWFTYTDLCVLLE--NLNW------------REALSAIYQHFTKVT 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycYNP_609519.1 CYCLIN_CCNY_like 228..324 CDD:410243 30/144 (21%)
cnppd1NP_956222.1 CYCLIN_ScPCL1-like 75..168 CDD:410260 24/93 (26%)

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