DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycY and psl1

DIOPT Version :10

Sequence 1:NP_609519.1 Gene:CycY / 34593 FlyBaseID:FBgn0032378 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_596374.1 Gene:psl1 / 2540751 PomBaseID:SPBC20F10.10 Length:243 Species:Schizosaccharomyces pombe


Alignment Length:189 Identity:40/189 - (21%)
Similarity:72/189 - (38%) Gaps:23/189 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 DEKLHPLTHDQVPDN----------YDTHNPEHRQIYKFVRTLFNAAQLTAECAIITLVYLERLL 262
            |.|......||:|.:          :...|.....|..::..:......|.:..:..|:||:|::
pombe    47 DSKQEATESDQIPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIV 111

  Fly   263 TYAELDV--GPCNWKRMVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFN 325
            .:....|  ...|..|.::.....|||.:.|....|..|.:: ..|.:.::|.||..|.....||
pombe   112 HHFHFTVFINSFNIHRFLIAGFTAASKFFSDVFYTNSRYAKV-GGIPLHELNHLELSFFVFNDFN 175

  Fly   326 INVPSSVYAKYYFDLRTLAEANELNF-PTE-------PLS--KERAQKLEAMSRVMQDK 374
            :.:.......|...|.:....|..|: ||:       |:|  .::.|:.|...|.:.|:
pombe   176 LFISLEDLQAYGDLLLSWYRQNGQNYNPTDVSCSIESPISHTPQQNQQDEQPRRPIMDR 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycYNP_609519.1 CYCLIN_CCNY_like 228..324 CDD:410243 20/97 (21%)
psl1NP_596374.1 Cyclin 29..176 CDD:400780 27/129 (21%)

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