DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycY and Ccnyl1

DIOPT Version :10

Sequence 1:NP_609519.1 Gene:CycY / 34593 FlyBaseID:FBgn0032378 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_011236801.1 Gene:Ccnyl1 / 227210 MGIID:2138614 Length:328 Species:Mus musculus


Alignment Length:370 Identity:200/370 - (54%)
Similarity:245/370 - (66%) Gaps:49/370 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKNSCCA--YSSPQSDRKSKDMPPVFEERIIQLGHPPHTSQHQLDGHHGSASAVHLHHHHHGH 63
            |||..:||.  .:||:..|::....|.:|..:.:.               .:..||.:.......
Mouse     1 MGNTLTCCVSPNASPKLGRRAGPAEPDYESEVYEA---------------AAGDAVAVAPAPAAA 50

  Fly    64 NQQQNQQGGGGDNYENQQNLQHISEREALEG---EEDPSVDPTAATMFLERSKVENGGMTRKRSQ 125
            .:......|.|:.:    :|||||:||..|.   |.:||..|.|:|:||.:|:.:   :..||..
Mouse    51 VEPAELDFGAGEGH----HLQHISDREMPEDLALESNPSDHPRASTIFLSKSQTD---VREKRKS 108

  Fly   126 QQIAQQAGSGGGGGGGGGGGSTPGGNSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLA 190
            ..:                      |....|...||.||||||:|||||||||||:.|:|||:||
Mouse   109 NHL----------------------NHVSPGQLTKKYSSCSTIFLDDSTVSQPNLRTTIKCVTLA 151

  Fly   191 IYYHIKNRQSDRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNAAQLTAECAIITL 255
            ||||||||.::|.||||||:.||||.::||:.|..|:|||:.||:||||||:||||||||||:||
Mouse   152 IYYHIKNRDANRSLDIFDERSHPLTREKVPEEYFKHDPEHKFIYRFVRTLFSAAQLTAECAIVTL 216

  Fly   256 VYLERLLTYAELDVGPCNWKRMVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLE 320
            |||||||||||:|:.|.||||:||||||||||||||||||||||||||||||||||||:||.|||
Mouse   217 VYLERLLTYAEIDICPTNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLE 281

  Fly   321 LLQFNINVPSSVYAKYYFDLRTLAEANELNFPTEPLSKERAQKLE 365
            |||||||||:|||||||||||:||:.|.|||...||||||||.||
Mouse   282 LLQFNINVPASVYAKYYFDLRSLADDNNLNFLFAPLSKERAQNLE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycYNP_609519.1 CYCLIN_CCNY_like 228..324 CDD:410243 83/95 (87%)
Ccnyl1XP_011236801.1 CYCLIN_CCNY_like 189..285 CDD:410243 83/95 (87%)

Return to query results.
Submit another query.