DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog8 and Cog8

DIOPT Version :10

Sequence 1:NP_609503.2 Gene:Cog8 / 34571 FlyBaseID:FBgn0287204 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001099652.1 Gene:Cog8 / 291990 RGDID:1307074 Length:634 Species:Rattus norvegicus


Alignment Length:549 Identity:248/549 - (45%)
Similarity:344/549 - (62%) Gaps:13/549 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DLENERVLKLIFPDGVPD-NLRGNPELDNYLAKLGTCKVEQLKKEQTRLAEEARTILEQTQDLAI 71
            ::|:|.:|..:|.|..|: ..|..|::..||.:|....:::|::|..|||||...:|:||:|||.
  Rat    26 EVEDEGLLASLFRDRFPEAQWREKPDVGRYLRELSGSGLDRLRREPERLAEERAQLLQQTRDLAF 90

  Fly    72 SNYRTFITTAENSRSIFSEFLRSEQQLDTLVSKLPDLSVQCERFLQDSAELNEQRRLNSITLQKN 136
            :||:|||..||.:..|...|...|..|..|:.:||.....|..|::::.|::..||:|::||.::
  Rat    91 ANYKTFIRGAECTERIHRLFGDVEASLGHLLDRLPSFQQSCRNFVKEAEEISSNRRMNTLTLNRH 155

  Fly   137 AQLLEVLELPQLMERCIREGRYEEALELAAYATRLGQHQGHIPVVTSIVRSVEALWHNMLVQLVA 201
            .::||:||:||||:.|:|...||||||||||..||.:....|||:..||..|......||.||:.
  Rat   156 TEILEILEIPQLMDTCVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQ 220

  Fly   202 QLRTDLQLPKCLQIVGYLRRMQAFGDNELRLKFLQARDAWLTSCLEAIPTADAQQHLSKTIEITR 266
            ||||.:|||.||:::||||||..|.:.|||:||||||||||.|.|.|||..|...|::||||..|
  Rat   221 QLRTSIQLPACLRVIGYLRRMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFHITKTIEACR 285

  Fly   267 INLFNIITQYRAIFPEDEGTLKTQSSLRPLQG-VSCNGDRLFQAWLHNKISDFLQTLERDLQLGV 330
            ::||:||||||||| .||..|     |.|..| .:.|...:|..|:..|||.|||.||.||..|:
  Rat   286 VHLFDIITQYRAIF-SDEDPL-----LPPAMGQYTVNEGAIFHGWVLQKISQFLQVLETDLYRGI 344

  Fly   331 GS-VETVLGQCMYFGLSFSRVGADFRALMAPIFVGVIRRRFESSVEQVDEQFERELERFTLINKV 394
            |. ::::|||||||||||||||||||..:||:|..|....|:.:||:..|:|:.|:..:|||:..
  Rat   345 GGRLDSLLGQCMYFGLSFSRVGADFRGQLAPVFQRVAINTFQKAVEEAVEKFQDEMTSYTLISAA 409

  Fly   395 AL--HSHARKQVDPEQE-SYAPPEALLDFYPLAALCNGYLSALNELRLCAPLALATDVTRCLQHS 456
            |:  .|:....|...|. :..||..||||.|||...|..|.|.|:||||.|:|||.|||..|:.:
  Rat   410 AILGSSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALAQDVTGALEDA 474

  Fly   457 LQQAAQRVLAFYRQEQQAFAGSEREAFVRLCSCLAYDLVPYIQRCIHGVFPPQSLTVHLGISLLQ 521
            |.:..:.:|||:|.|:..|:..|.|.||:.|:....|||||:.||:..:|||..:...||||..|
  Rat   475 LMKVTKTILAFHRAEEAVFSSGEHEIFVQFCTAFLEDLVPYLNRCLQVLFPPAQIAQTLGISPTQ 539

  Fly   522 LEQQ-QLTYLQQTRILEPLKHLLPTKALV 549
            |.:. .|.::..:.|.|||..:||.:..|
  Rat   540 LSKHGNLGHVNISAIQEPLAFILPKREAV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog8NP_609503.2 Dor1 37..355 CDD:427729 159/319 (50%)
Cog8NP_001099652.1 Dor1 56..370 CDD:427729 155/315 (49%)

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