DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cog8 and cog8

DIOPT Version :9

Sequence 1:NP_609503.2 Gene:Cog8 / 34571 FlyBaseID:FBgn0287204 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_002937620.2 Gene:cog8 / 100495068 XenbaseID:XB-GENE-955478 Length:605 Species:Xenopus tropicalis


Alignment Length:545 Identity:231/545 - (42%)
Similarity:341/545 - (62%) Gaps:8/545 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDLENERVLKLIFPDGVPDNLRGNPELDNYLAKLGTCKVEQLKKEQTRLAEEARTILEQTQDLAI 71
            ||:|:|.:|..:|....|::.|.:|:..:||.:|.:..:::|::|..||::|...||:||:|||.
 Frog    11 MDVEDEGLLASVFRASFPESWRDSPDFASYLLELSSFGLDKLRREPERLSDERSQILQQTRDLAF 75

  Fly    72 SNYRTFITTAENSRSIFSEFLRSEQQLDTLVSKLPDLSVQCERFLQDSAELNEQRRLNSITLQKN 136
            |||:|||.|||.:..|:.:|.:.|..:..|::|||.....|..|::.:.|::..||:|::||.::
 Frog    76 SNYKTFIRTAECTELIYRDFGQVEGSVSHLLNKLPSFQESCRNFVKQAEEISSSRRMNTLTLNRH 140

  Fly   137 AQLLEVLELPQLMERCIREGRYEEALELAAYATRLGQHQGHIPVVTSIVRSVEALWHNMLVQLVA 201
            .::||:||:||||:.|:|.|.||||||||||..||.:....:||:..||..|......||.||:.
 Frog   141 TEILEILEIPQLMDTCVRNGYYEEALELAAYVRRLEKKHSSVPVIQGIVNEVRQSAQLMLNQLLQ 205

  Fly   202 QLRTDLQLPKCLQIVGYLRRMQAFGDNELRLKFLQARDAWLTSCLEAIPTADAQQHLSKTIEITR 266
            |||:::|||.||:::||||||..|.:.|||:|||||||:||.|...:||..|...||:||||..|
 Frog   206 QLRSNIQLPACLRVIGYLRRMDVFTEAELRIKFLQARDSWLRSLQNSIPNDDPYFHLTKTIESCR 270

  Fly   267 INLFNIITQYRAIFPEDEGTLKTQSSLRPLQGVSCNGDRLFQAWLHNKISDFLQTLERDLQLGVG 331
            :|||::||||||||.:::..|....   |...:..:...:|..|:..|:::|||.|:.|||.|||
 Frog   271 VNLFDVITQYRAIFSDEDPLLLPPP---PTGTLPISEGAIFHGWVLQKVTEFLQVLQNDLQRGVG 332

  Fly   332 S-VETVLGQCMYFGLSFSRVGADFRALMAPIFVGVIRRRFESSVEQVDEQFERELERFTLIN-KV 394
            . ::::|||||||||||||||.|||..:.|||..|....|..:|.:..|:|:.|:..:|||: ..
 Frog   333 GRLDSLLGQCMYFGLSFSRVGVDFRGQLPPIFQRVAAETFAKAVHEAVEKFQEEMNMYTLISAPT 397

  Fly   395 ALHSHARKQVDPEQE--SYAPPEALLDFYPLAALCNGYLSALNELRLCAPLALATDVTRCLQHSL 457
            .|.|.......|..:  :..||..||||.|||...|..|.|.|:||||.|:||...||..||.:|
 Frog   398 VLGSTITPVPTPTAQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALTEAVTTTLQDAL 462

  Fly   458 QQAAQRVLAFYRQEQQAFAGSEREAFVRLCSCLAYDLVPYIQRCIHGVFPPQSLTVHLGISLLQL 522
            ::..:.:|.|.|.|:.||:..|||.|::.|:....||.|::.||:..:|||......||::...|
 Frog   463 EKVVKTILTFQRAEEAAFSMQERELFIQFCTVFLEDLTPFLNRCLQVLFPPAQRAQILGVAPAHL 527

  Fly   523 EQQ-QLTYLQQTRILEPLKHLLPTK 546
            .:. .|..:..|.:.|.|:.:||.|
 Frog   528 SRYGNLCSIDVTVLQEALEGILPQK 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog8NP_609503.2 Dor1 37..379 CDD:252394 158/342 (46%)
cog8XP_002937620.2 Dor1 41..381 CDD:252394 158/342 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 312 1.000 Domainoid score I1290
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13018
Inparanoid 1 1.050 438 1.000 Inparanoid score I1639
OMA 1 1.010 - - QHG53892
OrthoDB 1 1.010 - - D1531483at2759
OrthoFinder 1 1.000 - - FOG0005159
OrthoInspector 1 1.000 - - oto105558
Panther 1 1.100 - - LDO PTHR21311
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R223
SonicParanoid 1 1.000 - - X4192
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

Return to query results.
Submit another query.