DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and sall3b

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_001038615.1 Gene:sall3b / 568041 ZFINID:ZDB-GENE-030131-9140 Length:1247 Species:Danio rerio


Alignment Length:1343 Identity:387/1343 - (28%)
Similarity:556/1343 - (41%) Gaps:354/1343 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NRINYRG----TGGTRSGSGERER---DR--------DRDRDRDRDRERDRDTLLAKELDAD--S 54
            |.:..||    ..||.|.||..|.   :|        ....:..:....|...|:.||.:..  |
Zfish    27 NALLLRGGDEEDSGTESRSGGEETHVCERCCAEFFKWSEMLEHQQKCTEDPPVLIVKEKEEKVIS 91

  Fly    55 NNNGTE----PQMEAEAVPESDTERETAE---ERGEEQEPENSNEALDLSL------------IS 100
            ..:.||    .|.::..:..|:...|.||   |..||....:.:|.:|:||            :.
Zfish    92 RGSPTESLFSAQSDSAEMEASEINSELAEKVDEMPEETHIIDLDEQMDISLPEHKTSNLSPLPLD 156

  Fly   101 SGGRESLPG----------SGHVSLEALQHTKVAVAQFA----ATAMAGNHQSADLAMVQSTIFN 151
            .....|.|.          |.:|:||.|..|:||||||:    ....||...||.:.|:...:..
Zfish   157 DENATSPPAPPITNHYDMPSTNVTLEILHSTRVAVAQFSQSIHCAGSAGKLNSAAIPMILEQLMA 221

  Fly   152 VQRQHLMQLQLIQHLQSQL----KRAEAAALGRHSH---SDEEEEEPEPEPEPKKQPTNGLKEEL 209
            :|:|.:.|||||:.::||:    ::...|||...|.   ||......:....|...|.:|:....
Zfish   222 LQQQQVQQLQLIEQIRSQVAVMNRQPTQAALNPASKSLPSDSNTYNFQGIAPPPVLPLSGVMPST 286

  Fly   210 ELEQGPESEQDQESRREENSKTDKRGTEDRKA-----------EP-----EGYQSMMCDISSSLA 258
            ...|...|:....:|....|.....|....:|           .|     .|...::...|.||:
Zfish   287 VNGQASVSQASMLARPSLLSSQPSTGQIGSRALDSATSSLTSSSPHLFSYSGASPLLPTCSGSLS 351

  Fly   259 ------------------SSIIT--------NHDPPPAPNEPNCLEMLQRRTEEVLDS-ASQSLH 296
                              ||:::        ...||.....||.|..: ..|...||. |:...|
Zfish   352 NVSNTQSVSTPSPLSACQSSLLSPSANLPLLPQSPPNGVIFPNPLASI-AATASALDPLAAMMKH 415

  Fly   297 AAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTK 361
            ........|.:.||.: |....|||:|::|.|:|||.||||||||||||||||.||:||::|:||
Zfish   416 RKGKLPSVSIFDSKPS-SEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTK 479

  Fly   362 GNLKVHYQRHTQIFPPMLLPPGVAP----NVGHSGQGQVQGEQYPIRLPFAP-----------PV 411
            ||||||:|||.:.:|.:.:.|...|    |:..|       ...|..:.|.|           ||
Zfish   480 GNLKVHFQRHKEKYPHVQMNPYPVPEYLDNIPTS-------SGIPYGMSFPPEKAGPTWLDSKPV 537

  Fly   412 APVGQEQHQNQVEEPEEIRQEIP--VPQAEDLSKPMVKEKEKSHSPVERVKTPKEVKTDAALPSS 474
            .|.          .|..:..::|  ||..|.||...      :.:|.||  :|..       ||.
Zfish   538 LPT----------VPSSVGLQLPPTVPIIESLSDSF------TSTPSER--SPHR-------PSP 577

  Fly   475 EKPEKEISKPVVTSSRRNGSVRKRQTSAVSPPQEDRERDLVE-------HLHIAKLVRRSSASR- 531
            .:.|...|.|..|.:..:.|     |.|.| |:.:||.::.:       ||....|:|..|.|. 
Zfish   578 ARGELAPSSPNPTGTETDVS-----TIAAS-PKSNREAEITQSFNTEEVHLPSNSLIRNGSNSNI 636

  Fly   532 -------ESQPAEYSLAQM----ERIIDKSWEDLI--------------EIDKTSETSKLQQLVD 571
                   ...|.:.::.:.    ..||..|...||              :..:|||||||||||:
Zfish   637 LLSQSMLTETPVKGNVPESTDVPSAIIKPSSPPLISDQFRSKFPFGGLQDSMQTSETSKLQQLVE 701

  Fly   572 NIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPP 636
            ||:.|:.:||||:.|.:|:||:|:|:||.|.|||||||:||:|||||.||||||.|..:|:.|||
Zfish   702 NIDKKMMEPNQCVICHRVLSCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLKTHFGVHRAKPP 766

  Fly   637 MRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIE--DQNSNKSLGTS 699
            :|.|..||:|.:||:|.::||||||:|     .|||   ..|...||.:..:  |..|..|:.|.
Zfish   767 LRIQHSCPICQKKFTNAVVLQQHIRMH-----MGGQ---IPNTPLAETIYEKDTDMESFDSMSTY 823

  Fly   700 DTLDFSTTIS-DHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERERR 763
            |. |....|| :..|...|:|:.       |:.|..||          |.|:........| .:.
Zfish   824 DD-DCLDDISFEEEGDVVENSEN-------TLSSFSDS----------PPPISSLPSSISE-SQN 869

  Fly   764 IPNDCSDERSHSNPDLTGGRSESGEMPAMDLSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGM 828
            :..|.|...|.||    |.:....:....||.:|.:::|.:                        
Zfish   870 VGGDLSINLSQSN----GKKMVRCDPMDNDLHAPHTSTGEM------------------------ 906

  Fly   829 PMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQS 893
                          |.|::|::     |:|         |...::      .:|:.:..:...|.
Zfish   907 --------------ENHSMGNS-----LMP---------HSSSSI------HIPTYSNSQPEGQH 937

  Fly   894 EHAKEPATGHAQRPQCSDAGSPYGAKLTLNPNLFAKKPPSSSSSSSGEKLPESSNPPFPAEN--- 955
            ||                         :::.||.:|.|.:::       :.:|.:...||.|   
Zfish   938 EH-------------------------SVSLNLSSKTPEAAA-------IVKSESTDCPAANAVN 970

  Fly   956 ----------PPATPI-KEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDAEQSLMK--MQLH 1007
                      |..:.: ||:|...|...:|..:. :.|....|.|.| .|...|.|:..  ..|.
Zfish   971 GVTLNQTGIQPIKSSVKKENPFNVQCFSKEHENV-QRSTEQDTKNLP-TAVKLEMSICSRPYMLK 1033

  Fly  1008 AHRFPA----SPLDFQQALMS-----AGPPTSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHT 1063
            ...|||    ||....:.::.     .|||.....|   .:|.|..|.:||||:||||||.||||
Zfish  1034 EGPFPAFGLQSPTSRSEVMIPGVTSLTGPPPPRRTP---KQHNCSACGKNFSSASALQIHERTHT 1095

  Fly  1064 GDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRPGPNSGQGHPGSSAEQEF 1128
            |:|||.|:||.:|||||||||||||||||.|..:|||||:|:|.|:  ....|.....|.|.|:.
Zfish  1096 GEKPFGCSVCGRAFTTKGNLKVHMGTHMWNNTPARRGRRLSVENPI--ALLGGDALKFSEAFQKD 1158

  Fly  1129 MQRR-----PELFFPYLPPFFNGLPPKPGELS---PGAFPNIP 1163
            :..|     ...:..|.....|||..:..|:|   .|..|.:|
Zfish  1159 LAARAMNVDQNFWSRYAAAITNGLAMRNNEISVIQSGGVPQLP 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 38/50 (76%)
C2H2 Zn finger 323..344 CDD:411020 15/20 (75%)
C2H2 Zn finger 323..343 CDD:275368 14/19 (74%)
C2H2 Zn finger 351..371 CDD:411020 14/19 (74%)
C2H2 Zn finger 351..371 CDD:275368 14/19 (74%)
SUF4-like 583..>636 CDD:411020 33/52 (63%)
C2H2 Zn finger 583..604 CDD:411020 10/20 (50%)
C2H2 Zn finger 583..603 CDD:275368 10/19 (53%)
zf-H2C2_2 595..620 CDD:463886 18/24 (75%)
C2H2 Zn finger 611..631 CDD:411020 14/19 (74%)
C2H2 Zn finger 611..631 CDD:275368 14/19 (74%)
C2H2 Zn finger 643..663 CDD:275368 12/19 (63%)
lambda-1 1013..>1061 CDD:212564 20/56 (36%)
SUF4-like 1039..>1087 CDD:411020 34/47 (72%)
C2H2 Zn finger 1042..1063 CDD:411020 14/20 (70%)
C2H2 Zn finger 1042..1062 CDD:275368 13/19 (68%)
C2H2 Zn finger 1070..1090 CDD:275368 16/19 (84%)
C2H2 Zn finger 1070..1087 CDD:411020 13/16 (81%)
sall3bNP_001038615.1 SUF4-like 438..520 CDD:411020 46/88 (52%)
C2H2 Zn finger 441..462 CDD:411020 15/20 (75%)
C2H2 Zn finger 441..461 CDD:275368 14/19 (74%)
C2H2 Zn finger 469..489 CDD:411020 14/19 (74%)
C2H2 Zn finger 469..489 CDD:275368 14/19 (74%)
PLN03209 <498..669 CDD:178748 44/208 (21%)
SUF4-like 713..>775 CDD:411020 38/61 (62%)
C2H2 Zn finger 713..734 CDD:411020 10/20 (50%)
C2H2 Zn finger 713..733 CDD:275368 10/19 (53%)
zf-H2C2_2 725..750 CDD:463886 18/24 (75%)
C2H2 Zn finger 741..761 CDD:411020 14/19 (74%)
C2H2 Zn finger 741..761 CDD:275368 14/19 (74%)
zf-C2H2 771..793 CDD:395048 12/21 (57%)
C2H2 Zn finger 773..793 CDD:275368 12/19 (63%)
SUF4-like 1074..>1119 CDD:411020 33/44 (75%)
C2H2 Zn finger 1074..1095 CDD:411020 14/20 (70%)
C2H2 Zn finger 1074..1094 CDD:275368 13/19 (68%)
C2H2 Zn finger 1102..1122 CDD:275368 16/19 (84%)
C2H2 Zn finger 1102..1119 CDD:411020 13/16 (81%)

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