DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and si:ch211-212k18.5

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:XP_021333427.1 Gene:si:ch211-212k18.5 / 562900 ZFINID:ZDB-GENE-030131-379 Length:1139 Species:Danio rerio


Alignment Length:1218 Identity:274/1218 - (22%)
Similarity:444/1218 - (36%) Gaps:360/1218 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GGTRSGSGERERDRDRDRDRDRDRERDRDTLLAKELDADSNNNGTEPQ----------------- 62
            ||||....|           |:.:.:...|.||.|  |.|:::.:.|.                 
Zfish    18 GGTRLMPQE-----------DQLQVKSPSTSLASE--ATSSSSSSSPTSLQDCQPPLAPRPSPGG 69

  Fly    63 MEAEAVPESDTERETAEERGEEQEPENSNEALDLSLISSGGRESL-PGSGHVSLEALQH------ 120
            :.|.::|...:           ..|...|.....|........|| |...|.||.:..|      
Zfish    70 LHAPSLPNESS-----------SPPHWPNHIASYSTSLPNAHSSLSPDFPHPSLSSQTHSPPPGQ 123

  Fly   121 ---TKVAVAQ-----------FAATAMAGN-----------HQSA-------------------D 141
               |:::..|           .:||....:           ||.:                   .
Zfish   124 QKSTRISSHQPHSTVTSPPMGISATTTTSSLSSSSSLGAPPHQGSPSPIHQTPSSPSEQLQVPPT 188

  Fly   142 LAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAEAAALGRHSHSDEEEEEPEPEPEP--KKQPTNG 204
            ||::...:..:|::.:.|:|:.:.:..|:.|..    |..|..|..:...|.:...  ...|.||
Zfish   189 LAVLLEELRVLQQRQIHQMQITEEICRQVLRLG----GMVSAPDAPQGSVEGQQRDAGSSSPPNG 249

  Fly   205 LKEELELEQGPESEQDQESRREENSKTDKRGTEDRKAEPEGYQSMMCDISSSLASSIITNHD--- 266
            :.....:.|.|.            ||.:...|...:| |....|.....||||.:|..|.|.   
Zfish   250 VSGASLINQAPV------------SKPNLSQTNGGRA-PYSTTSSSTSSSSSLVTSTATVHPLSL 301

  Fly   267 ----PPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIF------KH 321
                ||...||.:....:.....  |:..:..|....:.::...::|..:.|.|...      :|
Zfish   302 TLGLPPRYLNEKSANTPISHGNG--LNFQTSPLPTVSISQDQLSHSSTVSTSNGSSSSSSGRQQH 364

  Fly   322 RCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPM---LLPPG 383
            .|::|||:..|.|:|||||||||||||:.|.||.|:|||:||||.|:.||.:..|.:   ||||.
Zfish   365 ICRFCGKVLSSDSSLQIHLRSHTGERPYQCPVCLSRFTTRGNLKAHFLRHREQNPELSLSLLPPA 429

  Fly   384 VAPNVGHSGQGQVQGEQYPIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQA---EDLSKPM 445
            ::.. ..||.|....::               :.:.:.:.|||..::..:.||.:   ..||.| 
Zfish   430 LSEQ-SQSGSGSGGSQR---------------RRKRRAEDEEPFGVKGSVGVPDSLALGFLSGP- 477

  Fly   446 VKEKEKSHSPVERVKTPKEV---------------KTDAALPSSEKPEKEISKPVVTSSRRNGSV 495
                  :|.....:..|..|               :..||..:|..|..:.|...:|||...|.:
Zfish   478 ------AHPSPSSLPLPPSVDLALLSTAHSLLQLNRASAAAAASVSPSVQSSSSSITSSAMTGQL 536

  Fly   496 ---RKRQTSAVSPPQEDRERDLVEH-------LHIAKLVRRSSAS-------------------- 530
               ::::....:||     ...:.|       .|:.|::..|..|                    
Zfish   537 KGSKQQRFDENTPP-----HPTLHHGSPYSQLAHLPKILFPSGPSAHHPSLALLRPPHLTSPHLP 596

  Fly   531 -----------RESQPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIEN----KLTD- 579
                       :.|.|...|.:..              ..||:|||||:|...:|.    |.|: 
Zfish   597 LTFPFSSYPKPQNSSPPSSSPSSS--------------SATSDTSKLQRLAQKLEKQPLPKSTNE 647

  Fly   580 ----------------------------------------------------PNQCIFCQKVMSC 592
                                                                ||||..|.:|:||
Zfish   648 GQTNTQANDISTSSNAISAYRREMMAALGLNPNPSSEPTSQEIQGSAASSLVPNQCGVCLRVLSC 712

  Fly   593 RSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPP-MRSQFKCPVCHQKFSNGIIL 656
            ..:|::|..||.|||||.||:|||:|:|||:|:||::.|:.:|. .|.|..||:|.:||:|.::|
Zfish   713 PRALRLHQATHLGERPFPCKLCGRSFSTKGSLRAHLATHRARPANARGQNSCPLCQRKFTNAVVL 777

  Fly   657 QQHIRIHTMDDGSGGQGAPAAN------PGEAERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQR 715
            |.|||:|.     |||..|..|      ...::..||....|.:||..:.::..:.::.| ||..
Zfish   778 QHHIRMHL-----GGQLPPEVNGDLQSEDAHSQIDGISLPKSLQSLPLNMSMSSAASLLD-SGAI 836

  Fly   716 SESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERERRIPNDCSDERS------H 774
            ......||.|:.  |:|..|..:|:|..:.| ..||:: |..:|.. .:.|..:.|.:      |
Zfish   837 LRDPTSGDTDQL--MESDQDPYENTSENSPT-FTLEKQ-DPSRENS-PLDNSVALEENHYVTVHH 896

  Fly   775 SNPDLTGGRSESGEMPAMDLSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGM----------- 828
            |...:..|.:...|...:.|.:.:|:...:|.....|||:.....:|..|.|..           
Zfish   897 SKSQVVNGSAHKDEDTPLSLCTRTSSQDPLFDKKWQNGASHHTVISGPKPSLSSEALDLSPALTP 961

  Fly   829 PMPPNLLL---MAAAREEMHALGHAHAKFPLLPFGPLGFMGLHP-PPNVCNLCFKMLPSL----- 884
            |..|.|..   .::.:..:|..|..|..       .......|| |.||.....|...:.     
Zfish   962 PSSPGLESKPDQSSEQTTLHVNGIDHVP-------EFKDADSHPAPENVIEHKLKADDTQESKME 1019

  Fly   885 -AALESHLQSEHAKEPATGHA--QRPQ-------CSDAGSPYGAK------LTLNPNLFAKKPPS 933
             :|:|.|.:.....|..:..|  .:||       |::.|..|.::      :.::.....:...:
Zfish  1020 ESAVEDHKKDSEKTEVTSSEAPVAQPQRSEKPYSCTECGKEYASRSGLKGHMKIHSGSMNQVAGT 1084

  Fly   934 SSSSSSG----EKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGAS 977
            :||.|||    |::.||::.....|:  |..:.|:...:..:.|..||
Zfish  1085 ASSQSSGGKVAERMEESTHRKLRGED--AKNLSEESTDKLSLTEHPAS 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 32/50 (64%)
C2H2 Zn finger 323..344 CDD:411020 13/20 (65%)
C2H2 Zn finger 323..343 CDD:275368 12/19 (63%)
C2H2 Zn finger 351..371 CDD:411020 12/19 (63%)
C2H2 Zn finger 351..371 CDD:275368 12/19 (63%)
SUF4-like 583..>636 CDD:411020 27/52 (52%)
C2H2 Zn finger 583..604 CDD:411020 8/20 (40%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 595..620 CDD:463886 15/24 (63%)
C2H2 Zn finger 611..631 CDD:411020 12/19 (63%)
C2H2 Zn finger 611..631 CDD:275368 12/19 (63%)
C2H2 Zn finger 643..663 CDD:275368 11/19 (58%)
lambda-1 1013..>1061 CDD:212564
SUF4-like 1039..>1087 CDD:411020
C2H2 Zn finger 1042..1063 CDD:411020
C2H2 Zn finger 1042..1062 CDD:275368
C2H2 Zn finger 1070..1090 CDD:275368
C2H2 Zn finger 1070..1087 CDD:411020
si:ch211-212k18.5XP_021333427.1 PHA03378 <58..268 CDD:223065 36/236 (15%)
SUF4-like 364..>420 CDD:411020 34/55 (62%)
C2H2 Zn finger 366..387 CDD:411020 13/20 (65%)
C2H2 Zn finger 366..386 CDD:275368 12/19 (63%)
C2H2 Zn finger 394..414 CDD:411020 12/19 (63%)
C2H2 Zn finger 394..414 CDD:275368 12/19 (63%)
C2H2 Zn finger 703..723 CDD:275368 7/19 (37%)
zf-C2H2 729..751 CDD:395048 13/21 (62%)
C2H2 Zn finger 731..751 CDD:275368 12/19 (63%)
C2H2 Zn finger 764..784 CDD:275368 11/19 (58%)
zf-C2H2 1052..1074 CDD:395048 3/21 (14%)
C2H2 Zn finger 1054..1074 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.

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