DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and salm

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster


Alignment Length:1352 Identity:412/1352 - (30%)
Similarity:581/1352 - (42%) Gaps:365/1352 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TRSGSGERERDRDRDRDR---------DRDRERDRDTLLAKELDADSNNNG----TEPQME---- 64
            :||...|.|:..::....         |...|.|..:....|::...:||.    |:|..|    
  Fly    75 SRSPEPEEEQPEEQSTSEQSIPEQSTPDHQLENDIKSEAKSEIEPVEDNNNRVAMTKPSSEEREP 139

  Fly    65 --AEAVPESDTERETAEERGEEQEPENSNE---ALDLSLISSGGRESLP--------GSG-HVSL 115
              :.::|.|.....:|||...|:.||...|   .:|:.........::|        |:| .|:|
  Fly   140 NASGSMPSSPVAEASAEEAATERTPEKEKEKDVEVDVEKPDEAPSSAVPSTEVTLPGGAGAPVTL 204

  Fly   116 EALQHTKVAVAQFAATAMAGNHQSAD-------LAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRA 173
            ||:|:.::|:|||||..:|.....||       ||.:|.|:||:|:|.|.|:||||.|||||   
  Fly   205 EAIQNMQMAIAQFAAKTIANGSNGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQL--- 266

  Fly   174 EAAALGRHSHSDEEEEEPEPEPEPKKQPTNGLKEE-----LELEQGPES---------------- 217
               ||.:....::.||:.:.| :.::|.|:..:||     :||.|..|:                
  Fly   267 ---ALNQAKQEEDTEEDADQE-QDQEQETDTYEEEERIADMELRQKAEARMAEAKARQHLINAGV 327

  Fly   218 -----------------EQDQES---RREENSKTDKRGT-EDRKAEPEGYQSMMCDISSSLASSI 261
                             |.|.||   ||.....|.|..| :|..|:.:..::......|.|||||
  Fly   328 PLRESSGSPAESLKRRREHDHESQPNRRPSLDNTHKADTAQDALAKLKEMENTPLPFGSDLASSI 392

  Fly   262 ITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGE---IFKHRC 323
            |||||..|   |||.|::||:|.:||||||||.:.|..|.:::: :..|..:.:|.   .|||||
  Fly   393 ITNHDDLP---EPNSLDLLQKRAQEVLDSASQGILANSMADDFA-FGEKSGEGKGRNEPFFKHRC 453

  Fly   324 KYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFP------------ 376
            :||||:|||.||||||:|||||||||.||||||:||||||||||:|||.|.||            
  Fly   454 RYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEH 518

  Fly   377 -----PMLL----PPGVAPNVGHSGQGQVQGE---QYPIRLP-----FAPPV---------APVG 415
                 |.||    |...:||  ||......|.   .:|...|     :.||:         ||  
  Fly   519 MDKFHPPLLDQMSPTDSSPN--HSPAPPPLGSAPASFPPAFPGLQNLYRPPMEILKSLGAAAP-- 579

  Fly   416 QEQHQNQVEE-PEEIRQEIPVPQAEDLSKPMVK---------------------EKEKSHSPV-- 456
               ||...:| |.::|:  |.||.:: .:|.||                     |.|....|:  
  Fly   580 ---HQYFPQELPTDLRK--PSPQLDE-DEPQVKNEPVEEKDQREEHEQEMAECSEPEPEPLPLEV 638

  Fly   457 ----ERVKTPKEVKTD--------AALPSSE--KP----EKEISKPVVTSSRRNGSVRKRQTSAV 503
                |||:..::||.:        ...||||  .|    ...:..|.|....:..::...|:|..
  Fly   639 RIKEERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPPVVQPIQPAALMHPQSSPG 703

  Fly   504 S-------------PPQED--RERDLVEHLHIAKLVRRSSASRESQPAEYSLA------------ 541
            |             ||:||  .|| ...:...||::.....|....||..:|.            
  Fly   704 SQSHLDHLPTPGQLPPREDFFAER-FPLNFTTAKMLSPEHHSPVRSPAGGALPPGVPPPPHHHPH 767

  Fly   542 -------------QMERII------DKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQ 587
                         :|..::      |.|||:.||:..|.||.||::|:.|  .|::|||||:.|.
  Fly   768 HMARSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTCETMKLKELMKN--KKISDPNQCVVCD 830

  Fly   588 KVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSN 652
            :|:||:|:||||.|||||||||:|:||||||.||||||.||::|||:||||:..:|||||:|:||
  Fly   831 RVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSN 895

  Fly   653 GIILQQHIRIHTMDDGSGGQGAPA-ANPGEAERLGIEDQNSNKSLG------TSDTLDFST---- 706
            .::||||||:||        |.|. ..|.:.:...|.|...:...|      .:....|..    
  Fly   896 ALVLQQHIRLHT--------GEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGALPGG 952

  Fly   707 -------TISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREK------ 758
                   ....|:|.....|..||.|:  .||..:|..|:.|:...:...||:|.||.:      
  Fly   953 PGGPPGPNHGAHNGALGSESSQGDMDD--NMDCGEDYDDDVSSEHLSNSNLEQEGDRSRSGDDFK 1015

  Fly   759 ----ERERRI------------PNDCSDERSHSNPDLTGGRSESGEMPAMDL---SSPSSNSGRI 804
                |::.||            |...:....||....:...|.|....:..:   |||:.:....
  Fly  1016 SLLFEQKLRIDATGVVNTNPVRPRSSASSHGHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQ 1080

  Fly   805 FATGLANGAA--GGGSGNGGLPMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGL 867
            .|..|...||  ...|....||......||:|        .....|.:||...:|. .||     
  Fly  1081 GALDLTPRAAPTSSSSSRSPLPKEKPVSPPSL--------PRSPSGSSHASANILT-SPL----- 1131

  Fly   868 HPPPNVCNLCFKMLPSLAALESHLQSEH----------AKEPATGHAQRPQCSDAGSPYGAKLTL 922
              ||.|...|   ||  ..|:.|||.:|          |...|..|....|.: |...:..:|..
  Fly  1132 --PPTVGIDC---LP--PGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQQMA-ALHQHQEQLRR 1188

  Fly   923 NPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGAT 987
            ......:|..:::::::.....:...||            :..||.|    ||     |.|.|..
  Fly  1189 EAAEAQQKAAAAAAAAAAAAAAQRQTPP------------QARDQRQ----EG-----GPGAGPP 1232

  Fly   988 SNYPQEAGDAEQSLMKMQLHAHRFPASPL--------------DFQQALMSAGPPTSSLDPPVNN 1038
            .|          .||..:.....||..||              ...|::|.|.|........|..
  Fly  1233 PN----------PLMGARPPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRG 1287

  Fly  1039 KHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTH 1090
            ...|.:|.:.|...|||:||.|:||.::||:|::|.:.||||||||.||.||
  Fly  1288 STTCGICYKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTH 1339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 43/50 (86%)
C2H2 Zn finger 323..344 CDD:411020 16/20 (80%)
C2H2 Zn finger 323..343 CDD:275368 15/19 (79%)
C2H2 Zn finger 351..371 CDD:411020 17/19 (89%)
C2H2 Zn finger 351..371 CDD:275368 17/19 (89%)
SUF4-like 583..>636 CDD:411020 37/52 (71%)
C2H2 Zn finger 583..604 CDD:411020 12/20 (60%)
C2H2 Zn finger 583..603 CDD:275368 11/19 (58%)
zf-H2C2_2 595..620 CDD:463886 20/24 (83%)
C2H2 Zn finger 611..631 CDD:411020 15/19 (79%)
C2H2 Zn finger 611..631 CDD:275368 15/19 (79%)
C2H2 Zn finger 643..663 CDD:275368 14/19 (74%)
lambda-1 1013..>1061 CDD:212564 15/61 (25%)
SUF4-like 1039..>1087 CDD:411020 23/47 (49%)
C2H2 Zn finger 1042..1063 CDD:411020 9/20 (45%)
C2H2 Zn finger 1042..1062 CDD:275368 9/19 (47%)
C2H2 Zn finger 1070..1090 CDD:275368 12/19 (63%)
C2H2 Zn finger 1070..1087 CDD:411020 10/16 (63%)
salmNP_723670.2 SUF4-like 450..520 CDD:411020 48/69 (70%)
C2H2 Zn finger 453..474 CDD:411020 16/20 (80%)
C2H2 Zn finger 453..473 CDD:275368 15/19 (79%)
C2H2 Zn finger 481..501 CDD:411020 17/19 (89%)
C2H2 Zn finger 481..501 CDD:275368 17/19 (89%)
SUF4-like 826..>876 CDD:411020 35/49 (71%)
C2H2 Zn finger 826..847 CDD:411020 12/20 (60%)
C2H2 Zn finger 826..846 CDD:275368 11/19 (58%)
C2H2 Zn finger 854..874 CDD:411020 15/19 (79%)
C2H2 Zn finger 854..874 CDD:275368 15/19 (79%)
C2H2 Zn finger 886..906 CDD:275368 14/19 (74%)
SUF4-like 1291..>1341 CDD:411020 27/49 (55%)
C2H2 Zn finger 1291..1312 CDD:411020 9/20 (45%)
C2H2 Zn finger 1291..1311 CDD:275368 9/19 (47%)
zf-C2H2 1317..1339 CDD:395048 13/21 (62%)
C2H2 Zn finger 1319..1339 CDD:411020 12/19 (63%)
C2H2 Zn finger 1319..1339 CDD:275368 12/19 (63%)

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