DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and Sall2

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_001100732.1 Gene:Sall2 / 305854 RGDID:1309272 Length:1004 Species:Rattus norvegicus


Alignment Length:1194 Identity:281/1194 - (23%)
Similarity:420/1194 - (35%) Gaps:397/1194 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SNNN-GTEPQMEAEAVPE-SDTERETAEERGEEQEPE-------NSNEALDLSLISSGGRESLPG 109
            ||:: .:.|:.|..:.|: .|||.....:.|....|:       ...|:....|::..|..:..|
  Rat    73 SNSSVSSVPRPEGHSRPQVMDTEHSNLPDSGSSGPPDPAWGSERRGEESSGQFLVAGTGTAAGGG 137

  Fly   110 SGHVSLEALQHTKVAVAQFAAT--------------------AMAGNHQSADLAMVQSTIFNVQR 154
            .|.:         :|..:..||                    .:...|.:..|.:.:..:  :|:
  Rat   138 GGLI---------LASPKLGATPLPPESTPAPPPPPPPPPPPGVGSGHLNIPLILEELRV--LQQ 191

  Fly   155 QHLMQLQLIQHLQSQLKRAEAAALGRHSHSDEEEEEPEPEPEPKKQPTNGLKEELELEQGPESEQ 219
            :.:.|:|:.:.:..|:     ..||  |..........|...|.....:..|..|.|....:..|
  Rat   192 RQIHQMQMTEQICRQV-----LLLG--SLGQTVGAPASPSELPGTGTASSTKPLLPLFSPIKPAQ 249

  Fly   220 DQESRREENSKTDKRGTEDRKA------EPEGYQSMMCDISSSLASSIITNHDPPPAPNEPNCLE 278
            ..::....:|.:...|.|..|.      .|.|.|....      ...:..:|.|.|||:     .
  Rat   250 TGKTLASSSSSSSSSGAEPPKQAFFHLYHPLGSQHPFS------VGGVGRSHKPTPAPS-----P 303

  Fly   279 MLQRRTEEVLDS------------ASQSLHAAQMQEE-----------------YSEYASKEAQS 314
            .|...|::::.|            |:|.|.||:..|.                 |.|..|...:.
  Rat   304 ALPGSTDQLIASPHLAFPGTTGLLAAQCLGAARGLEAAASPGLLKPKNGSGELGYGEVISSLEKP 368

  Fly   315 RGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPML 379
            .|   :|:|::|.|:|||.|||||||||||||||:.|||||::|||:||||||:.||.:.:|.:.
  Rat   369 GG---RHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNVCGNRFTTRGNLKVHFHRHREKYPHVQ 430

  Fly   380 LPPGVAPN-----VGHSGQGQVQGEQYPIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQAE 439
            :.|...|.     :..||            ||:...|             .||:..:|...|...
  Rat   431 MNPHPVPEHLDYVITSSG------------LPYGMSV-------------PPEKAEEEAATPGGG 470

  Fly   440 DLSKPMVKEKE--KSHSPVERVKTPKEVKTDAALPSSEK--------PEKEISK--------PVV 486
            ...||:|....  .:...:..:.|.........||:..|        |:.::.:        ..:
  Rat   471 VERKPLVASTTALSATESLTLLSTGTSTAVAPGLPTFNKFVLMKAVEPKSKVDENTPPGSEGSAI 535

  Fly   487 TSSRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSW 551
            :....:||..:.|.|           .||..|....|:.....|..|.|..|.|..:..      
  Rat   536 SGVADSGSATRMQLS-----------KLVTSLPSWALLTNHLKSTGSFPFPYVLEPLGA------ 583

  Fly   552 EDLIEIDKTSETSKLQQLVDNIE-----------------------NKLTDPNQCIFCQKVMSCR 593
                   ..||||||||||:.|:                       :..:.||||:.|.:|:||.
  Rat   584 -------SPSETSKLQQLVEKIDRQGAVAVASTASGAPTTSAPAPSSSASGPNQCVICLRVLSCP 641

  Fly   594 SSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQ 658
            .:|::|...|.|||||:||:|||||:|:|||:||...||..|..|:|..||:|.:||:|.:.|||
  Rat   642 RALRLHYGQHGGERPFKCKVCGRAFSTRGNLRAHFVGHKTSPAARAQNSCPICQKKFTNAVTLQQ 706

  Fly   659 HIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRSESSQGGD 723
            |:|:|.     ||| .|.......|..|:..:||:                    ::|.:|..|.
  Rat   707 HVRMHL-----GGQ-IPNGGSTLPEGGGVAQENSS--------------------EQSTASGPGS 745

  Fly   724 FDEFMTMDSTDDSRDNSSAATATPHP------LERERDREKERERRIPNDCSDERSHSNPDLTGG 782
            |                      |.|      .|.|...|:|.:.....|.:||.|     |.|.
  Rat   746 F----------------------PQPQAQQPSAEEEISEEEEEDEEEEEDVTDEDS-----LAGR 783

  Fly   783 RSESGEMPAMDLSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHAL 847
            .||||...|:.:...|..         .:||....:.:|..|..|..:..|    ..|.::    
  Rat   784 GSESGGEKAISVRGDSEE---------VSGAEEEAATSGAAPTNGKEVDNN----EKATQQ---- 831

  Fly   848 GHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDA 912
                              .|.|||                           |...:..|||..:.
  Rat   832 ------------------ALPPPP---------------------------PPPDNLDRPQPMEQ 851

  Fly   913 GSPYGAKLTLNPNLFAKKPPSSSSSSSGE--KLPESSNP--PFPAENPPATPIKEDPDQEQLMVE 973
            |                  ||..|....|  ||..:|:|  ..|.|                   
  Rat   852 G------------------PSDVSGGMEEEAKLEGTSSPMAALPQE------------------- 879

  Fly   974 EGASAGEGSGTGATS--NYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPV 1036
                 |||:.|.:..  |.|:                             .|...|..||     
  Rat   880 -----GEGTSTPSVEELNLPE-----------------------------AMKKEPGESS----- 905

  Fly  1037 NNKHFCHVCRRNFSSSSALQIHMRTHTGDKP-FQCNVCQKAFTTKGNLKVHM-GTHMWTNPTSRR 1099
             ::..|.||.::|.:.:||:.|.:||..|.| |.|..|::.|..:..||.|| ..|....|.:..
  Rat   906 -SRKACEVCGQSFPTQTALEEHQKTHPKDGPLFTCVFCRQGFLDRATLKKHMLLAHHQVPPFAPH 969

  Fly  1100 GRRMSLELPMRPGPNSGQGHPGSS 1123
            |.:....|.:.||.:|....||.|
  Rat   970 GPQNIATLSLVPGCSSSIPSPGLS 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 36/50 (72%)
C2H2 Zn finger 323..344 CDD:411020 15/20 (75%)
C2H2 Zn finger 323..343 CDD:275368 14/19 (74%)
C2H2 Zn finger 351..371 CDD:411020 14/19 (74%)
C2H2 Zn finger 351..371 CDD:275368 14/19 (74%)
SUF4-like 583..>636 CDD:411020 28/52 (54%)
C2H2 Zn finger 583..604 CDD:411020 7/20 (35%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 595..620 CDD:463886 15/24 (63%)
C2H2 Zn finger 611..631 CDD:411020 13/19 (68%)
C2H2 Zn finger 611..631 CDD:275368 13/19 (68%)
C2H2 Zn finger 643..663 CDD:275368 11/19 (58%)
lambda-1 1013..>1061 CDD:212564 11/47 (23%)
SUF4-like 1039..>1087 CDD:411020 17/48 (35%)
C2H2 Zn finger 1042..1063 CDD:411020 8/20 (40%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
C2H2 Zn finger 1070..1090 CDD:275368 7/20 (35%)
C2H2 Zn finger 1070..1087 CDD:411020 5/16 (31%)
Sall2NP_001100732.1 SUF4-like 371..458 CDD:411020 46/111 (41%)
C2H2 Zn finger 374..395 CDD:411020 15/20 (75%)
C2H2 Zn finger 374..394 CDD:275368 14/19 (74%)
C2H2 Zn finger 402..422 CDD:411020 14/19 (74%)
C2H2 Zn finger 402..422 CDD:275368 14/19 (74%)
C2H2 Zn finger 631..651 CDD:275368 7/19 (37%)
zf-C2H2 657..679 CDD:395048 14/21 (67%)
C2H2 Zn finger 659..679 CDD:275368 13/19 (68%)
zf-C2H2 690..711 CDD:395048 11/20 (55%)
C2H2 Zn finger 691..711 CDD:275368 11/19 (58%)
zf-C2H2_6 910..932 CDD:433576 9/21 (43%)
C2H2 Zn finger 910..930 CDD:275370 7/19 (37%)
C2H2 Zn finger 939..956 CDD:275370 5/16 (31%)

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