DRSC/TRiP Functional Genomics Resources

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Protein Alignment mre11 and mre11

DIOPT Version :10

Sequence 1:NP_523547.1 Gene:mre11 / 34565 FlyBaseID:FBgn0020270 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001107519.1 Gene:mre11 / 100135381 XenbaseID:XB-GENE-957956 Length:709 Species:Xenopus tropicalis


Alignment Length:652 Identity:267/652 - (40%)
Similarity:375/652 - (57%) Gaps:54/652 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DADNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQNAL 74
            |.::..:||||||.|||:.|||||||.|||:.|:|||.||...:||.:|||||||||..||:..|
 Frog     9 DDEDTFKILVATDIHLGFMEKDAVRGNDSFSTFDEILRLAQDNEVDFLLLGGDLFHDNKPSRRTL 73

  Fly    75 HKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNHDDPSGFGR 139
            |.|:|.||:|..||||:..|:||||...|..:....|||:|.||||::||||:|||||||:|...
 Frog    74 HICLEQLRKYCMGDRPIEFEVLSDQSVNFGYSKFPWVNYQDNNLNISLPVFSVHGNHDDPTGADA 138

  Fly   140 LSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKVKFNC 204
            |.:||:||.:||||:|||.|.:.:::|||||::||.|::|||||..|.|.||.|:..:.:|....
 Frog   139 LCALDILSCAGLVNHFGRATSVEKIDISPVLLQKGRSKIALYGLGSIPDERLYRMFVNKQVMMLR 203

  Fly   205 PENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSFLHLVIWGHEHDCRIEPEEN 269
            |.           ::|..||:|.|:||||:..||.||:||..|..||.|:||||||:|:|.|..|
 Frog   204 PR-----------EDESSWFNLFVIHQNRSKHGPTNYIPEQFLDDFLDLIIWGHEHECKINPTRN 257

  Fly   270 AKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIYKGKFKLKPLPLETVRPFVYESVVLADHADEL 334
            .::.||||||||||.||||.|||:|||||||.|...|..::.:||:|||.|..|.:||:|:.|..
 Frog   258 EQQLFYVSQPGSSVATSLSPGEAEKKHVGLLRIKGKKMNMQKIPLQTVRQFFIEDLVLSDYPDIF 322

  Fly   335 GLVEGDASTKVFKFAQERVEAMIERAVAQHTGHPKQPTLPLIRLRLLYTDESCMFNAIRFGEMLS 399
            .......:.::..|..|:||||::.|..:..|:.:||..||||||:.||.....||.:||.:...
 Frog   323 NPDNPKVTQEIESFCIEKVEAMLDTAERERLGNARQPDKPLIRLRVDYTGGFEPFNTLRFSQKFV 387

  Fly   400 TRVANVQDVVQF--SKVVKRTKTE-AVNLDKEALRRALEADNATRVEELVDRYFEEAKSNKPLKL 461
            .|.||.:|::.|  .|..|..|.. .:|..|...:...|. :..|||:||..||:.|:.|..|.|
 Frog   388 DRTANPKDIIHFFRHKEQKDKKDNITINFGKLDSKPLFEG-STLRVEDLVKEYFKTAEKNVQLSL 451

  Fly   462 FHSKALAEMTYRLLEQRDADAAENIVKFYKEKAVDHLMEAM--PNDENIDEELERFRALHK---- 520
            ...:.:.|.....:::.:.||.|.:|||..||....|.|..  ..::.||||:.:||...|    
 Frog   452 LTERGMGEAVQEFVDKEEKDALEELVKFQLEKTQRFLKERQIDAEEDKIDEEVRKFRETRKTNTN 516

  Fly   521 --HGDLLKML--------DTQGLKVKKEEKSM----SVLGSEVNV-STAPATGRGAARGRG---- 566
              ..::.:.:        .|..:.:..:::.|    ..|..:.:: ::.||.|||..||||    
 Frog   517 EEEEEVREAMIRARAHRSQTADIDMSDDDELMRKVSGPLSDDEDIGASMPARGRGRGRGRGGRGQ 581

  Fly   567 TARTRAGATAATRGKGQLDVTVS--STRTSGRQQTLLSSLMGS------RNTASYVIS-----DD 618
            |..|| |.:...||....|...|  :::.:|:..::|.:...|      ||......|     ||
 Frog   582 TTTTR-GTSRRGRGSAGADQPSSGRASKAAGKNMSILDAFKPSSRQPTARNMPKKTYSEDIEDDD 645

  Fly   619 SD 620
            ||
 Frog   646 SD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mre11NP_523547.1 mre11 13..413 CDD:273153 201/401 (50%)
mre11NP_001107519.1 mre11 11..403 CDD:273153 197/391 (50%)

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