DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-beta and cacnb2a

DIOPT Version :10

Sequence 1:NP_001260375.1 Gene:Ca-beta / 34557 FlyBaseID:FBgn0287724 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_068078517.1 Gene:cacnb2a / 795492 ZFINID:ZDB-GENE-080808-7 Length:636 Species:Danio rerio


Alignment Length:672 Identity:312/672 - (46%)
Similarity:399/672 - (59%) Gaps:100/672 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GSADSNYSQPS-SDLSLDEEKESLRREKERQALSQLDKARSKPVAFAVRTNVAYDGAIDDDSPVQ 104
            |||||..|:|| ||:||:|:||:||||.||||.:|||||:||||||||||||.|..:.:||.||.
Zfish    23 GSADSYTSRPSDSDVSLEEDKETLRREAERQAQAQLDKAKSKPVAFAVRTNVGYSASSEDDVPVP 87

  Fly   105 GGAVSFEIREFLHIKEKYDNNWWIGRLVKEGCDVGFIPSPAKLDN--IRMQNQTRPSRLYGTK-- 165
            |..:||:.::|||:|||::|:||||||||||||:||||||.||::  :|.:.:.:..|.|.:|  
Zfish    88 GTGISFDPKDFLHVKEKFNNDWWIGRLVKEGCDIGFIPSPVKLESSRLRQEQRAKQGRFYSSKSG 152

  Fly   166 GSSSGNLGAGGQAGAEPSRGSTPPTPGDESDSMG-------PGRHGKTPAAAAN-------KEKR 216
            .:||.:||    .....||.||||:...:.|:.|       |..|.::|.|:.|       :|||
Zfish   153 ANSSSSLG----DIVSNSRKSTPPSSAVDIDAAGLDAEESDPPPHQRSPKASPNTVISPLAREKR 213

  Fly   217 KPFFKKQETASPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRIIITRVMADISL 281
            .|||||.|.|.|||||||||||||||||||||||||||||||||||||||||||.||||.|||||
Zfish   214 MPFFKKTEHAPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRITITRVAADISL 278

  Fly   282 AKRSIMNNPSKRAIMERSSSRSDCLGKVQEEIERIFELARSLQLVVLDCDTINHPSQLAKTSLAP 346
            ||||::|||||.||:|||::||: |.:||.||||||||||:|||||||.|||||||||.||.|||
Zfish   279 AKRSVLNNPSKHAIIERSNTRSN-LAEVQSEIERIFELARTLQLVVLDADTINHPSQLGKTCLAP 342

  Fly   347 TIVYLKISSSKVLQRLIKSRGKSQAKNLSVQMVAAEKLAQCPPDMFDVILDENQLEDACEHIAEY 411
            .|||:||:|.||||||||||||||||:|:||||||:||||||.::||:|||||||||||||:|:|
Zfish   343 IIVYIKITSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPSELFDIILDENQLEDACEHMADY 407

  Fly   412 LETYWKATHPDIRAVPPIARPLPQEASPSADPARLGPTPPVDGEEFVDEQDPRMGMSGGDREGSR 476
            ||.|||:||      ||...|    ::|..|.........|..:|.:....|:  .:|.|...  
Zfish   408 LELYWKSTH------PPSGAP----STPLLDKLSAVTAAAVACKEQLTNTQPK--GTGSDEHA-- 458

  Fly   477 ERDRDSRERERERERERDYWDREFNRDRSSKDRERDLEWERERAREWERERERDWDREFDWDQ-- 539
              ||.:..|            ..|..|.......:...::.::...:|.|.|.:.|.|.:.||  
Zfish   459 --DRAAANR------------TSFYEDYHHHHHPQQQHYQTQKQESFEEEEEEEDDDEENTDQRH 509

  Fly   540 -GGTSYQHSRRQPTSVRHQERGGGVGAGGGGGGVGGGYERDRERERYERRERDLMHYDLNSDELL 603
             ......|.:.|.:|....||              ..:.|......:.|.........|:..|.|
Zfish   510 DNRDQQNHHKNQHSSSTRTER--------------HHHHRHHHHHHHHRHHHSRTARTLSKQETL 560

  Fly   604 D----------ERNFEYPAMRSGPSGASHHGHLSR-GGRLLEDPDFEREEAQMRMSSSRYGPSTR 657
            :          ::..|..:::  |:...||.|..| ..|..::.:::..|...|.          
Zfish   561 ESTETQTHSQPQQEEEQESVQ--PNHHRHHHHHHRHHHRNEKEKEYDHNERNSRQ---------- 613

  Fly   658 IDDPRDLPRGATVVDRDEYSPH 679
                    ||.....|:.:..|
Zfish   614 --------RGKQKSQREHHHHH 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-betaNP_001260375.1 VGCC_beta4Aa_N 41..81 CDD:463445 28/40 (70%)
SH3_CACNB 85..146 CDD:212797 40/60 (67%)
Guanylate_kin 234..415 CDD:395500 150/180 (83%)
cacnb2aXP_068078517.1 VGCC_beta4Aa_N 23..64 CDD:463445 28/40 (70%)
SH3_CACNB2 63..131 CDD:212973 46/67 (69%)
Guanylate_kin 231..411 CDD:395500 150/180 (83%)

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