DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-beta and cacnb1

DIOPT Version :10

Sequence 1:NP_001260375.1 Gene:Ca-beta / 34557 FlyBaseID:FBgn0287724 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_005163865.2 Gene:cacnb1 / 436925 ZFINID:ZDB-GENE-040718-399 Length:642 Species:Danio rerio


Alignment Length:658 Identity:325/658 - (49%)
Similarity:397/658 - (60%) Gaps:92/658 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRASSSDAPSV-----------QGGQH-------RESRF--GLGYPSYQSGYNKLFTQGSADS 45
            |||..:.|..||.           ..|.|       |:|||  ..|..|..:..|....||||||
Zfish     1 MVQEGNMSRTPSTSTQEIQMDMFDHHGSHAQGKYAKRKSRFKRSDGSTSSDTTSNSFVRQGSADS 65

  Fly    46 NYSQPS-SDLSLDEEKESLRREKERQALSQLDKARSKPVAFAVRTNVAYDGAIDDDSPVQGGAVS 109
            ..|:|| ||:||:|:.|:||:|.:||||:.|:||::|||||||||||.|:...:||.||||.|:|
Zfish    66 YTSRPSDSDVSLEEDPEALRKEADRQALATLEKAKTKPVAFAVRTNVGYNPGPNDDVPVQGMAIS 130

  Fly   110 FEIREFLHIKEKYDNNWWIGRLVKEGCDVGFIPSPAKLDNIR--MQNQTRPSRLYGTKGSSSGNL 172
            ||.::||||||||:|:|||||||||||:|||||||.||::.|  .:.:.|.:||..:|       
Zfish   131 FEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLESTRQLQEQRMRQNRLSSSK------- 188

  Fly   173 GAGGQAGAEPSRGSTPPTP------------------------GDESDSMGPGRHGKTPAAAANK 213
             :||.:..:.:.|:..|||                        .|..|..|.|  |...:...|.
Zfish   189 -SGGSSSLDVATGARRPTPPGTADLSSGLYDDALDSDVEEAETADTRDHKGVG--GSVTSPQGNL 250

  Fly   214 EKRKPFFKKQETASPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRIIITRVMAD 278
             .|.|||||.|...||||||||||::|||||||||||||||||||||||||:|||||.||||.||
Zfish   251 -PRLPFFKKMEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHKFEGRISITRVTAD 314

  Fly   279 ISLAKRSIMNNPSKRAIMERSSSRSDCLGKVQEEIERIFELARSLQLVVLDCDTINHPSQLAKTS 343
            |||||||::|||||..|:||||:||. |.:||.||||||||||:||||.||.|||||||||||||
Zfish   315 ISLAKRSVLNNPSKHTIIERSSTRSS-LAEVQSEIERIFELARTLQLVALDADTINHPSQLAKTS 378

  Fly   344 LAPTIVYLKISSSKVLQRLIKSRGKSQAKNLSVQMVAAEKLAQCPPDMFDVILDENQLEDACEHI 408
            |||.|||:||:|.||||||||||||||||:|:||||||:|||||||::||:|||||||||||||:
Zfish   379 LAPIIVYIKIASPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDIILDENQLEDACEHL 443

  Fly   409 AEYLETYWKATHPDIRAVP-PIARPLPQEASPSADPARLGPTPPVDGEEFV-DEQDPRMGMSGG- 470
            |||||.|||||||.....| |:.......|:.:|.|.   |...:.|...| .||...|...|| 
Zfish   444 AEYLEAYWKATHPPSSNPPNPLLNRTMATAALAASPE---PVSNLQGPFLVHGEQKREMPERGGL 505

  Fly   471 -----DREGSRERDRDSRERERERER---ERDYWDREFNRDRSS---KDRERDLEWERERAREWE 524
                 |..| ::..|.||.:.:...|   .:|.:|.|....|.|   .|.|.|...|.:..|.:.
Zfish   506 QDYQSDLSG-KQPLRSSRSQLQTGSRGLSRQDTFDSETQGSRDSAYTDDMETDPYEEPDPCRSYR 569

  Fly   525 RERERDWDREFDW-DQGGTSYQHSRRQ--PTSVRHQERGGG-------VGAGGGGGGVGGGYERD 579
            ........|:..| |:|....|.:...  |.:.:|| ||.|       ..|..||...|    |:
Zfish   570 LNPAHHAPRQASWEDEGAEPDQENLNMVPPPANQHQ-RGRGKLRERYCQDAEAGGATTG----RN 629

  Fly   580 RERERYER 587
            ..:|.:.|
Zfish   630 HNQEEWSR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-betaNP_001260375.1 VGCC_beta4Aa_N 41..81 CDD:463445 24/40 (60%)
SH3_CACNB 85..146 CDD:212797 45/60 (75%)
Guanylate_kin 234..415 CDD:395500 150/180 (83%)
cacnb1XP_005163865.2 VGCC_beta4Aa_N 61..102 CDD:463445 24/40 (60%)
SH3_CACNB1 102..169 CDD:212974 50/66 (76%)
Guanylate_kin 270..450 CDD:395500 150/180 (83%)

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