DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup160 and NUP120

DIOPT Version :10

Sequence 1:NP_609493.1 Gene:Nup160 / 34549 FlyBaseID:FBgn0262647 Length:1411 Species:Drosophila melanogaster
Sequence 2:NP_012866.1 Gene:NUP120 / 853808 SGDID:S000001540 Length:1037 Species:Saccharomyces cerevisiae


Alignment Length:1123 Identity:222/1123 - (19%)
Similarity:404/1123 - (35%) Gaps:311/1123 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 YVTDGFGTMPNAAVSYLTQDSQSAYFAVAYQSKLL-LHVMKCSTG--HTIT-HEIKEPKLMPWFL 223
            |:...|.:.......|...|        ||..|.: :|:...|..  :|:| .|:::..|:...|
Yeast    67 YICYHFSSRSTLLTFYPLSD--------AYHGKTINIHLPNASMNQRYTLTIQEVEQQLLVNVIL 123

  Fly   224 SNLKGALTGRSETLEAATSMAFSE---IGGEIFIL-------------VLYRNNELRLWSVDN-- 270
            .:      |...||:...|..||.   :.||.|.|             :.|.:.:..:..:::  
Yeast   124 KD------GSFLTLQLPLSFLFSSANTLNGEWFHLQNPYDFTVRVPHFLFYVSPQFSVVFLEDGG 182

  Fly   271 ---LQTVASINCSTELGQDSAAQGPQNSQLRKISDQNFCLFLSHNSRAEFICVSIMPDADDASVI 332
               |:.|..::....|..|       ||.|:.::     .|.|.:|::::..|.......:..:|
Yeast   183 LLGLKKVDGVHYEPLLFND-------NSYLKSLT-----RFFSRSSKSDYDSVISCKLFHERYLI 235

  Fly   333 NLVQNMVPAPQTDLVDF------------DATSSHIWALWSNAEGDFHVSAAYFASNNAIKWVSA 385
            .|.|| ......||..|            |:..||...:  .|.|::  .:.|   ||.:..:  
Yeast   236 VLTQN-CHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKV--EAVGEY--LSLY---NNTLVTL-- 290

  Fly   386 ALEPPPDRYCLTMEQGVDPRET-------YCSYIFHPGRFDRNVIAKALY------MFRRVNLQF 437
                      |.:|.|:....|       ..:|.|. .....|:.|.|::      :.|.:.|..
Yeast   291 ----------LPLENGLFQMGTLLVDSSGILTYTFQ-NNIPTNLSASAIWSIVDLVLTRPLELNV 344

  Fly   438 DVKQLSMSVL-------KEQVCQAVEDE-------IQNELKDFVVTDEEY-LEISTRLWD---RF 484
            :...|::.||       |.|:.. |.||       |::..|..|....|: |:|.|:..|   .|
Yeast   345 EASYLNLIVLWKSGTASKLQILN-VNDESFKNYEWIESVNKSLVDLQSEHDLDIVTKTGDVERGF 408

  Fly   485 YSCCEQYHIKLSEPTGLAVLGGMDAVCLVRRQSFALLRPCEVLEHLLLIGEHNDEVATYVAPLFR 549
            .:...:|..::.|                        |..::|....:|..||:: ..|:|.|..
Yeast   409 CNLKSRYGTQIFE------------------------RAQQILSENKIIMAHNED-EEYLANLET 448

  Fly   550 NDPEMAKGFVELMNVVTLLDKLISEDIKIELDKQLYQRESPVEVI----------SKLVARISMI 604
            ...::...|.|..::....|::|..:.....:..||:..:.||..          |:|...:..:
Yeast   449 ILRDVKTAFNEASSITLYGDEIILVNCFQPYNHSLYKLNTTVENWFYNMHSETDGSELFKYLRTL 513

  Fly   605 DDNGPILPSNCVRQIQQKLQNIPNLEPALEMLLDVLCMIDPDEPPHDYSLST--RFLQSSGALMG 667
            :.....|.::.:|.|.:|             .||::....||      |::|  :|.......:.
Yeast   514 NGFASTLSNDVLRSISKK-------------FLDIITGELPD------SMTTVEKFTDIFKNCLE 559

  Fly   668 SEYGLSILSETVKQMAMIRFSVCRNLLVLQYMAYG---QNEMESE---NVLTNLNYLNSYYTLVW 726
            :::.::.|.....::......|..|.|:...|..|   :.:..|.   :..|::..|.|.:.|:.
Yeast   560 NQFEITNLKILFDELNSFDIPVVLNDLINNQMKPGIFWKKDFISAIKFDGFTSIISLESLHQLLS 624

  Fly   727 IAETPISSSTPAGFEASIQRLSRAQLFSGYNRPYSSHLK-----HNGNDQTTLLRLFLESKGLFS 786
            |           .:..::|.|....||......:..|:.     |  ..|..||.|:.:.|.|.:
Yeast   625 I-----------HYRITLQVLLTFVLFDLDTEIFGQHISTLLDLH--YKQFLLLNLYRQDKCLLA 676

  Fly   787 ALTMLLKHDSLSLDSEQLNLRQSLL---QLVGYINKMLWPGSPIY------------VFPEWLFG 836
              .:|||      ||.:.:......   ||:.||:.:   .|.:|            .|..::..
Yeast   677 --EVLLK------DSSEFSFGVKFFNYGQLIAYIDSL---NSNVYNASITENSFFMTFFRSYIIE 730

  Fly   837 TCHHIIVQDYVRILSNWCSV---QKHARRFMLAVSLLDCGEAHKAVHLF--HEAESGIVEDDFLF 896
            ...|..::.::..:.  |..   ....:.||.|::|..||...::..:|  |:....|.:....|
Yeast   731 NTSHKNIRFFLENVE--CPFYLRHNEVQEFMFAMTLFSCGNFDQSYEIFQLHDYPEAINDKLPTF 793

  Fly   897 EHVLKNTPLYGKLQNSVSRGDTISPEDTKLAIVHYYLKVIQLFE----QHSALDYIIQLADMAIR 957
            ...||:...:|   :|:.: |.:...........:|.::..||:    |..||..|.:.|:.:::
Yeast   794 LEDLKSENYHG---DSIWK-DLLCTFTVPYRHSAFYYQLSLLFDRNNSQEFALKCISKSAEYSLK 854

  Fly   958 VLQPDDPQ----------------LPMFQSIVFNNHLQLGHYVEAYTALVNNADISRRKDCLRQL 1006
            .:|.::.|                ..||:.::  :.|:|||                  :||...
Yeast   855 EIQIEELQDFKEKQHIHYLNLLIHFRMFEEVL--DVLRLGH------------------ECLSDT 899

  Fly  1007 VITLFQNKCLPLLMQFSYIGLQDEFESIV----------ESRARSMSI-------DQN------E 1048
            |.|.|    |.||:| ..|..:|.|.:::          |...|::.|       .||      |
Yeast   900 VRTNF----LQLLLQ-EDIYSRDFFSTLLRLCNAHSDNGELYLRTVDIKIVDSILSQNLRSGDWE 959

  Fly  1049 VYNFLYAFHTNKGNMRKASTVMYEQAMRFQVDSDAPNALEKRCSSLLICLNCLHLVDSRY-RWIA 1112
            .:..||.|.....:.|.|:.|:| |.:..|.|.|   .:.||...|:: :|.|...||.| :|| 
Yeast   960 CFKKLYCFRMLNKSERAAAEVLY-QYILMQADLD---VIRKRKCYLMV-INVLSSFDSAYDQWI- 1018

  Fly  1113 KPVLGDEQVITIDQDNDD 1130
               |...:|:|:....|:
Yeast  1019 ---LNGSKVVTLTDLRDE 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup160NP_609493.1 Nup160 28..530 CDD:432020 83/434 (19%)
NUP120NP_012866.1 Nup160 91..495 CDD:432020 91/468 (19%)

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