DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup160 and SAR1

DIOPT Version :9

Sequence 1:NP_001285832.1 Gene:Nup160 / 34549 FlyBaseID:FBgn0262647 Length:1411 Species:Drosophila melanogaster
Sequence 2:NP_001185129.1 Gene:SAR1 / 840234 AraportID:AT1G33410 Length:1504 Species:Arabidopsis thaliana


Alignment Length:1633 Identity:347/1633 - (21%)
Similarity:605/1633 - (37%) Gaps:411/1633 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EWIEVKI--------NTGTQSTLQDLKTFETSGGYCYKNTKNVQTRNRFIYWR---TYQDVLELS 77
            :|||:.:        :.|..|: :|.:..:......|.::..:...:....||   |..:.|||.
plant    24 KWIEISVPSPSVSSSSIGANSS-EDNECVQLPLSEDYASSSVIGEPSISFVWRINKTSPNALELL 87

  Fly    78 EVSLDISLQRNHLRLRF--TDSAVLNVSLTEQGTSVTLLV----VTVSSVHRYVFPLKVA---GQ 133
            ::|.........||..|  |.|....|...|.|.|..|:.    :|.|.|   |:.||::   ..
plant    88 QLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGRLVYFLYSLTPSGV---VYVLKLSNTLAY 149

  Fly   134 EGGAASPEDLLSQSIFYDVNDKINDPSTYYVTDGFGTMPNAAVSYLTQDSQSAYFAVAYQS---- 194
            :.|:..|.|.|   |..||...:|:                  |.:|..:.|..|....:|    
plant   150 KSGSVFPLDHL---IHLDVRPYLNE------------------SRVTSVAASPGFIFLGRSDGCV 193

  Fly   195 ---KLLLHVMKCSTGHTITHEIKEPKLMPWFLSNLKGALTG------RSETLEAATSMAFSEIGG 250
               :.:::..|.|..|   .|:::....        |.|.|      |...:.|...:..||:.|
plant   194 SCFQPIVYFQKSSGFH---QELRDDTGF--------GRLWGFVRLQCRGTVVAAVQDLFISEVHG 247

  Fly   251 EIFILVLYRNNELRLWSV-------------DNLQTVASINCSTELGQDSAAQG--PQNSQLRKI 300
            ..::.||:.:..||:|.:             .||:.|..:.  ..||:.....|  |.....||.
plant   248 RNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVR--LWLGKADYDSGIIPLAVLYRKS 310

  Fly   301 SDQN---FCLFLSHNSRAEFICVSIMPDADDASVINLVQNMVPAPQTDLVDFDATSSHIWALWSN 362
            .:.:   ..::..|.|.||.|.:|:     |:.:.|     :|..:.:|.|...||..||.|.:|
plant   311 MNDSMDVITVYGLHFSSAEGIALSL-----DSGLQN-----IPLEEGELRDVRFTSDKIWTLKAN 365

  Fly   363 AEGDF-------------------HVSAAYF----ASNNAIKWVSAALEPPPDRYCLTMEQGVDP 404
            ....:                   ::|...|    :|::.:...:.:|........:.....:..
plant   366 ELTSYMLCQKSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQIMGFISSIFL 430

  Fly   405 RETYCSYIFHPGRFDRNVIAKALYMFRRVN-LQFDVKQLSMSVLKEQVCQAVEDEIQNELKDFVV 468
            |...|..|||      ||..:...:....| ...:.:.||:..|..::...||.|         |
plant   431 RRLLCPGIFH------NVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHE---------V 480

  Fly   469 TDEEYLEISTRLWDRFYSCCEQYHIKLSEPTGLAVLGGMDAVCLVRRQSFALLRPCEVLEHLL-- 531
            |.|..:.: ...|..|.:....:....:||..|.|..  |.:.|||..|.:|....|..||.|  
plant   481 TAETSISV-FHWWKNFCTSYLHHWCSNNEPRTLLVQS--DVIGLVRNNSVSLFFRLENAEHSLGG 542

  Fly   532 LIGEHNDEVATYVAPLFRNDPEMAKGFVELMNVVTLLDK------------------LISEDIKI 578
            ...||:: :.:....:..:|.|:   ..|::...:.:.|                  :||.|   
plant   543 SSSEHSN-LTSLDLGVSHSDHEI---LAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSD--- 600

  Fly   579 ELDKQLYQRESPVEVISKLVARISMIDDNGPILPSNCVRQIQQK--------------LQNIPNL 629
                         |::.:||          .||.|.....|.|:              |:...||
plant   601 -------------EIVPRLV----------NILESGYSTTIGQRTWSDLGADRAWEKELEAHKNL 642

  Fly   630 EP-ALEMLLDV--LC--------MIDPDEPPHDYSLSTRFLQSSGALMGSEYGLSILSETVKQMA 683
            .. :::|||.:  ||        :....|....|.:..:.:|.:.....|:...|||.:...|..
plant   643 RTFSIDMLLSLSALCQRAGSWEKVFTIMEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFV 707

  Fly   684 MIRFSVCRNL-LVLQYM--AYGQNEMESENV----LTNL----NYLNSYYTLVWIAETPISSSTP 737
            .:.|....:: |::.|:  ..||..|..:::    |..|    :.::.:..:::...||..|::.
plant   708 KVMFESAFDIFLLISYLLNIAGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSM 772

  Fly   738 AGFEASIQRLSRAQLFSGYN-RPYSSHLKHNG---------NDQTTL------LRLFLESKGLFS 786
            ..|..   :||..|:.|..: |.:::.|...|         :|::.:      || :|.|..:.:
plant   773 EDFSL---KLSSLQIDSSIDKRSWNAMLGKCGFSLAFILLFSDRSCIVDGRFNLR-YLPSSQIIT 833

  Fly   787 ALTM----LLKHDSLSLDSEQLNLRQSLLQLVGYINKMLWPGSPIYVFPEWLFGTCHHIIVQDYV 847
            :|..    .:::.....||..|..|.:.|.|     :::..|....|  |.:.     ::|:..:
plant   834 SLVQNFISWIRYSKTGDDSSSLLRRSTELSL-----RLIRNGQSDAV--ERIL-----VVVEASL 886

  Fly   848 R----------ILSNWCSVQKHARRFML-------AVSLLDCGEAHKAVHLFHEAESGIVEDDFL 895
            |          ...:||.:| |.|...|       |..:|...:...|:..|..|.||  |..: 
plant   887 RGEKTFGCSQDTSGDWCLLQ-HLRGCCLLDQVQRGASGILRERKIIDAIRCFFRASSG--EGSW- 947

  Fly   896 FEHVLKNTPLYGKLQNSVSRGDTISPEDTKLAI-----------VHYYLKVIQLFEQHSALDYII 949
                        |..:|:|:....||..|..:|           :|||...:|:||:::..:...
plant   948 ------------KALHSLSKEAGFSPATTGPSILDGSTSSAAWKLHYYEWAMQIFERYNISEGAC 1000

  Fly   950 QLADMAIRVLQPDDPQ--LPMFQSI----------------VFNNHLQLGHYVEAYTALVNNADI 996
            |.|..|:.  |.||..  :.|.:..                ||...|.|....:||.|:::|.|.
plant  1001 QFAYAALE--QVDDAYNFIEMTEEFDPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAIISNPDE 1063

  Fly   997 SRRKDCLRQLVITLFQNKCLPLLM--QFSYIGLQDEF-ESIVESRARSMSIDQNEVYNFLYAFHT 1058
            ..::.|||:.:|.||:.....:|.  ...:|||.::. :.:.....||..:.:...|..|||:..
plant  1064 EIKRICLRRFIIVLFECGKTKILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPNPYKLLYAYEM 1128

  Fly  1059 NKGNMRKASTVMYEQAMRFQVDSDAPN------ALEKRCSSLLICLNCLHLVDSRYRWIAKPV-- 1115
            .:.|.|.|::.||:.:.|.:.:....:      .|::|.:.|...:|.|.||...|.|| .||  
plant  1129 RRHNWRMAASYMYQFSARLRSEGACKDYKHMSLVLQERLNGLSAAMNALALVHPGYAWI-DPVPE 1192

  Fly  1116 ------------LGDEQVITIDQDNDDGEPKCDEDKRGQEVVVLELADIRRELVH--AEALRELS 1166
                        ..:||:.:.||..  ||..|           :::..::.|.|.  ||.:..|.
plant  1193 ETTRYPVKKARRAEEEQLRSNDQPK--GEKSC-----------IDIEKLQNEFVFTTAEYMLSLK 1244

  Fly  1167 FYRKDTAAYERATPEELSYLLASSGLY----TAALKLSRGHSF--SVLPIFESLTSACVAATEDK 1225
            .:....:..|: .|.:|..||..:.||    |..||..||.:.  .:..|||::...|..|....
plant  1245 NFGWTYSGLEK-PPSDLVDLLVQANLYDMAFTVVLKFWRGSALKRELEKIFENMAIKCCPAKGTL 1308

  Fly  1226 SSDAWNWLQNND--MADLPHRSNA---ADMA--WTLLQ---KLVVDNEAKDSTLIRKSVVQRLLG 1280
            .|.....|.:||  :...|.||.|   :.:|  |.:|:   |..:|..|:    :..||...||.
plant  1309 WSSPNLMLTSNDEEVTHSPDRSPADQGSKLAGDWEILEVYLKRYIDIHAR----LPVSVASTLLQ 1369

  Fly  1281 LNAF--LPQWLINSYKLSHSRE-------------LLHLLVKHNRLLEAADLGCEIIAGMLGAGS 1330
            .::.  ||.|||..:|.....:             |..|.|.:.||.||.:|..|.:...  |.|
plant  1370 ADSCIELPLWLIQMFKDGQKEKALGMAGQEASPASLFQLYVDYGRLTEATNLLLEYMESF--ASS 1432

  Fly  1331 EYFEFKHAVNIANPQLCFPISTIDLLLHGLKINGKDDLDYEMAYFKLEEEVQ----RYIETIKRT 1391
            :..|......::.  :.||.:|::.|...|:.........|..: ||:|::.    .:::.:|..
plant  1433 KPAEVLKRKKVSG--VWFPYTTVERLWWELEKTMNSGRMVEQCH-KLKEQLHHALLNHLKLLKVD 1494

  Fly  1392 TDDKMSMA 1399
            ::|.:|.|
plant  1495 SNDAVSSA 1502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup160NP_001285832.1 Nup160 28..530 CDD:288551 118/576 (20%)
SAR1NP_001185129.1 Nup160 56..539 CDD:288551 115/547 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 86 1.000 Domainoid score I2809
eggNOG 1 0.900 - - E1_KOG4521
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I1985
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284127at2759
OrthoFinder 1 1.000 - - FOG0005509
OrthoInspector 1 1.000 - - oto4229
orthoMCL 1 0.900 - - OOG6_104899
Panther 1 1.100 - - LDO PTHR21286
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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