DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup160 and nup160

DIOPT Version :10

Sequence 1:NP_609493.1 Gene:Nup160 / 34549 FlyBaseID:FBgn0262647 Length:1411 Species:Drosophila melanogaster
Sequence 2:XP_031756356.1 Gene:nup160 / 105947166 -ID:- Length:1439 Species:Xenopus tropicalis


Alignment Length:1445 Identity:423/1445 - (29%)
Similarity:698/1445 - (48%) Gaps:122/1445 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SYREVI--PRNLSPAEWIEVKINTGTQSTLQDLKTFETSGGYCYKNTKNV--QTRNRFIYWRTYQ 71
            ||.|:|  .|..|...:.::.:.......:...|..:.:|||||..:.::  .||||||:|.:|.
 Frog    45 SYMELIGAERETSRRNFRDLSLRPDVSLVIGGPKYSDCAGGYCYNESGSLLSATRNRFIHWTSYA 109

  Fly    72 DVLELSEVSLDISLQRNHLRLRFTDSAVL--NVSLTEQGTSVTLLVVTVSSVHRYVFPLKVAGQE 134
            |.|||.|:||||:|..|.:||:..:.::|  .|.:.|...::.:|::|..:|||.:.|.......
 Frog   110 DTLELVELSLDINLLNNAVRLKILNCSILPGGVHICETQNNIIVLILTNQTVHRLILPHPSRMYR 174

  Fly   135 GGAASPEDLLSQSIFYDV-NDKINDPSTYYVTDGF-GTMPN--AAVSYLTQDSQSAYFAVAYQSK 195
            ....|...:  ||||.|: ....:||:..||.... |..||  |:.::|:.|.::.:...:....
 Frog   175 SEIISDSHI--QSIFTDIGKTNFHDPNNTYVIPAIPGRAPNSTASTAWLSSDGEALFALPSVSGG 237

  Fly   196 LLLHVM--KCSTGHTITHEIKEPKLMPWFLSN-LKGALTGRSETLEAATSMAFSEIGGEIFILVL 257
            :|:..|  :...|.....|:|:..:|...|:. :..::.|.........|:|...:..:.::..|
 Frog   238 ILVIKMPPRDMEGLVTIAELKQSSVMQRLLTGWMPSSIRGDPGPAHLPVSLAVHTLDHDSYLFAL 302

  Fly   258 YRNNELRLWSVDNLQTVASINCSTELGQDSAAQGPQNSQLRKISDQNFCLFLSHNSRAEFICVSI 322
            .::::||:||..:...:        :..|.....|.:..:|:.:.....|.|:::...|.:.:.:
 Frog   303 CQDHKLRMWSYKDQMCL--------MVADMLEYVPVSKDIRQTAGTGHKLRLAYSDTLEILYLGV 359

  Fly   323 ---MPDADDASVINLV-----------QNMVPAPQTDLVDFDAT--SSHIWALWSNAEGDFHVSA 371
               .|......|..||           .:.:...|..|:||..|  |.:|||||.:.:....:..
 Frog   360 YLHTPRQGQFCVFQLVCTESNRYSLEHTSSIFTNQETLIDFTFTLSSMNIWALWLDDDNQTVMKH 424

  Fly   372 AYFASNNAIKWVSAALEP-PPDRYCLTMEQGVDPRETYCSYIFHPGRFDRNVIAKALYMFRRVNL 435
            ..|..|.|..|....:.| |.|...:..||  :|:|.|...:|.||||....:.||:.:.|:.:.
 Frog   425 INFERNQAGHWNPVFVNPLPDDDLAIGDEQ--EPQEAYLECLFAPGRFTIAALQKAIQILRKGSG 487

  Fly   436 QFDVKQLSMSVLKEQVCQAVEDEIQNELKDFVVTDEEYLEISTRLWDRFYSCCEQYHIKLSEPTG 500
            :  |..||...||::|...||.||||.:.|:.|:.||:.:|:...|.:||:||.||...||.|..
 Frog   488 R--VLDLSWEELKKEVTLTVEKEIQNAVVDYDVSQEEFRQINIENWCKFYTCCLQYQETLSRPLA 550

  Fly   501 LAVLGGMDAVCLVRRQSFALLRPCEVLEHLLLI-GEHNDEVATYVAPLFRNDPEMAKGFVELMNV 564
            |.|....:.|||:|:...:.|.||..:|||.|: |||   :.|....:..:|.:.|...|.|:..
 Frog   551 LVVHPNTNMVCLLRKGFLSFLAPCSSVEHLYLVPGEH---LLTVDESVICDDVDGASDIVSLIQC 612

  Fly   565 VTLLDKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNGPILPSNCVRQIQQKLQNIPNL 629
            :.::...|:||:..:::......:||..|..:::..:...|.:      |.:..||.|||:|.|.
 Frog   613 LHMIADYITEDMAYQMESACCHPQSPERVAEQILEDLIANDID------NIMENIQNKLQDIRNP 671

  Fly   630 EPALEMLL---DVLCMIDPDEPPHDYSLSTRFLQSSGALMGSEYGLSILSETVKQMAMIRFSVCR 691
            ..|:..||   |....:|.::..|:..|:.      ..|.||....|::.:.:.:::..||.:||
 Frog   672 IQAISFLLQNMDYETNMDMEQSQHNVRLNL------STLYGSVTASSVVCQAIYKISATRFLICR 730

  Fly   692 NLLVLQYMAYGQNEM-----------ESENVLTNLNYLNSYYTLVWIAETPISSSTPAG-FEASI 744
            :||:||::.....:|           :.|.:......|.|||.:.|.::. ::.:.|.. .|:::
 Frog   731 DLLILQHLLLRLGDMALVGAGQLLHSQQELIPRAAQLLLSYYMIRWGSQC-LACAVPVDLLESNL 794

  Fly   745 QRLSRAQLFSGY--NRPYSSHLKHNGNDQTTLLRLFLESKGLFSALTMLLKHDSLSLDSEQ---- 803
            |.||..:|....  .|.|:|.::       |::.||.|..|. .....:..|..:...|.|    
 Frog   795 QHLSVLELSDSQVEKRRYTSGIQ-------TIVELFFEDVGR-KHFPQVFAHLFIQSGSSQVHRS 851

  Fly   804 LNLRQSLLQLVGYINKMLWPGSPIYVFPEWLFGTCHHIIVQDYVRILSNWCSVQKHARRFMLAVS 868
            ||....:.::..|:.::|||.:|.:.|.|.|...|.:..:|:|||:|..||.|...:..||||..
 Frog   852 LNWADLIHRITSYLLQLLWPSNPNFQFAECLMRNCQYTQLQEYVRLLLPWCQVNVGSCHFMLAQC 916

  Fly   869 LLDCGEAHKAVHLFHEAESGIVEDDFLFEHVLKNTPLYGKLQNSVSRGDTISPEDTKLAIVHYYL 933
            .|..||.|||:..|.:|.|.:..:||| |.:::           |..|:::||.      :.||.
 Frog   917 YLVAGEGHKALDCFSQAASEVEREDFL-EKLIR-----------VEEGESVSPR------LQYYN 963

  Fly   934 KVIQLFEQHSALDYIIQLADMAIRVLQPDDPQLPMFQSIVFNNHLQLGHYVEAYTALVNNADISR 998
            :|::|.|.....:.:||||.:||.....|.......::.:|.:||.:||..:||.||....|.||
 Frog   964 RVLRLLEDVGLPELVIQLATIAISEASDDWRSQAALRTRIFKHHLDMGHNSQAYDALTQIPDTSR 1028

  Fly   999 RKDCLRQLVITLFQNKCLPLLMQFSYIGLQDEFESIVESRARSMSIDQNEVYNFLYAFHTNKGNM 1063
            :.|||||||:.|.:...|..|::|.|:.|.:|...|:|||||::.:..:..|..|||||..:.|.
 Frog  1029 QLDCLRQLVVVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNY 1093

  Fly  1064 RKASTVMYEQAMRFQVDSDAPNALEKRCSSLLICLNCLHLVDSRYRWIAKPVLGD--EQVITIDQ 1126
            |||.|||:|..||...:......|:|:.:|.|.|||||.|:...|.||.:||.|.  |:.....:
 Frog  1094 RKAGTVMFEYGMRLGREVRTLRGLQKQVNSYLACLNCLRLIRPEYAWIVQPVSGAVYERPGASPK 1158

  Fly  1127 DNDDGEPKCDEDKRGQEVVVLELADIRRELVHAEALRELSFYRKDTAAYE-RATPEELSYLLASS 1190
            .|.|||......  ..::.:|||.|:.:|.|.|:....|:.:...|||.. .:..||:..||..:
 Frog  1159 RNYDGESSAVPS--SSQIEILELRDLEKEYVLAQTRLTLAKHNPSTAAIAGSSAAEEMVALLVQA 1221

  Fly  1191 GLYTAALKLSRGHSFSVLPIFESLTSACV---AATEDKSSDAWNWLQNNDMADL--PHRSNAADM 1250
            ||:..|:.|.:.....:..|||.|...|:   ...|...::||.||..|.:|.:  ...|:|.|.
 Frog  1222 GLFDTAISLCQTFKLGLTSIFEGLACKCIRLQQGGEAAQAEAWEWLAANQLATVITTKESSATDE 1286

  Fly  1251 AWTLLQKLVVDNEAKDSTLIRKSVVQRLLGLNAFLPQWLINSYKLSHSRELLHLLVKHNRLLEAA 1315
            ||.|:...:...|:| :||....::.:||.....||.||||.||...:.|||.|.:|::.|.|||
 Frog  1287 AWRLMISYLDKYESK-NTLYHHCIINKLLSHGVPLPNWLINRYKAMDAAELLRLYLKYDLLEEAA 1350

  Fly  1316 DLGCEIIAGMLGAGSEYFEFKHAVNIANPQLCFPISTIDLLLHGLKINGKDDLDYEMAYF-KLEE 1379
            :|..|.:..:||.|.:||..:..::..:..:.||.|.||.|  .|.:...::..:..|.. ||:.
 Frog  1351 ELVLEYVDALLGKGHQYFGIQAPLSATSQLVWFPYSAIDHL--RLALGENENNQHNQAILGKLQR 1413

  Fly  1380 EVQRYIETIKRTTDD 1394
            ::..|.:.:|:.|||
 Frog  1414 KMDEYFQKLKKATDD 1428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup160NP_609493.1 Nup160 28..530 CDD:432020 145/529 (27%)
nup160XP_031756356.1 Nup160 83..580 CDD:432020 144/510 (28%)

Return to query results.
Submit another query.