Protein Alignment Csl4 and Exosc1

DIOPT Version :10

• Sequence 1: NP_609492.1
• Gene: Csl4 / 34548
• FlyBaseID: FBgn0032346
• Length: 204
• Species: Drosophila melanogaster
• Sequence 2: NP_001388162.1
• Gene: Exosc1 / 679140
• RGDID: 1591855
• Length: 195
• Species: Rattus norvegicus
• Alignment Length: 189
• Identity: 91/189 - (48%)
• Similarity: 127/189 - (67%)
• Gaps: 7/189 - (3%)

  Fly    11 CLPGERLCRTEDSIVLGIGTYEQNGYIYASKSGIVNIEDSGDKCQVVSVHKPGFHLTIPATGDVV 75
            |:||||||..|:... |.|||.::|||::|.:|.:..........||||.:......:|..|.||
  Rat     8 CIPGERLCNLEEGSP-GSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETESQLLPDVGAVV 71

  Fly    76 TARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKSFRPGDVILARVIN-- 138
            |.:|.....:|||..|..|.:..|::::||.:||||:|.||||:|:|||||||||::||:||:
  Rat    72 TCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSFRPGDIVLAKVISLG 136

  Fly   139 QLEQSFLLTTAENELGVVIAYASDYRKTRVPMVPVGWSEMQCPQTTIKEPRKVAKVLPE 197
            ..:.::||||||||||||:|::    ::.|.|||:.|.|||||:|..||.||||:|.||
  Rat   137 DAQSNYLLTTAENELGVVVAHS----ESGVQMVPISWCEMQCPKTHTKEFRKVARVQPE 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Csl4	NP_609492.1	ECR1_N	10..47	CDD:464162	17/35 (49%)
		S1_CSL4	66..156	CDD:240217	47/91 (52%)
Exosc1	NP_001388162.1	ECR1_N	8..44	CDD:464162	17/36 (47%)
		S1_CSL4	62..154	CDD:240217	47/91 (52%)