DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reps and eps15l1

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:XP_012812304.1 Gene:eps15l1 / 100158630 XenbaseID:XB-GENE-959469 Length:919 Species:Xenopus tropicalis


Alignment Length:1016 Identity:189/1016 - (18%)
Similarity:328/1016 - (32%) Gaps:295/1016 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FYSELFQCCDVEKTGKVPMLKATELFRSADIANETVIEITGLAGIPSTALHISRTQFYSCLKLIA 76
            ||...::..|....|:|...:|....:.:.:::..:.:|..||. |....::.:..||..|:|:|
 Frog    16 FYETYYKQVDPSYIGRVGPAEAALFLKKSALSDIILGKIWDLAD-PEGKGYLDKHGFYVALRLVA 79

  Fly    77 AHQAAMPLRQELILATFPLPLPHFSWKEAVTAPVAVENGLTALPPPPPTDRRNSLRRNSQQ---- 137
            ..|:.    .|:.|::..:|:|         ||...:.....|..|||.:....:|...:.    
 Frog    80 CAQSG----HEVSLSSLNVPVP---------APKFHDTSSPLLITPPPVEGHWGVRIEEKSKFDG 131

  Fly   138 --EQLQDTSDVPSTD--SEVEQNESVD-------------DATGH-GRGTDGCG---VVSSSSRE 181
              :.|...:.:.|.|  ..|..|..:.             |..|| .|......   |..:..:|
 Frog   132 IFDSLVPVNGLLSGDKVKPVLMNSKLPLDVLGRVWELSDIDKDGHLDRDEFAVAMHLVYRALEKE 196

  Fly   182 NV-----------GRRRGGGTGGGSPEAWSTNSDSPTPTNSVAERPWAQDTLWQGLLGDEHRQL- 234
            .|           .:|:...|   .|.|.|....||.|.:|:...|             .|..: 
 Frog   197 PVPSVLPPSLIPPNKRKKTPT---FPGAVSVLPSSPPPKDSLRSTP-------------SHGSMS 245

  Fly   235 -LGTEEESSDRHSSDDDDNESELVTIYQITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFEKSR 298
             |.:....|.:|||  ...:..:..:..:|.:.|  ::..|.....|..|.:||...::.|.:|.
 Frog   246 SLNSAGSLSPKHSS--KPAQPAVNWVVPLTDKMR--FDDIFLQTDLDMDGFVSGLEVKDIFMQSG 306

  Fly   299 IPVEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLPHCLHPNVLQAAASGSGQG 363
            :....|.|||.|.|..:.|.|:..:|..||:.:.|:   :......|..|.|:::..:...:...
 Frog   307 LSQNILAHIWALADTRQTGKLNKDQFALAMYFIQLK---VSKGIDPPQVLSPDMIPPSERNTPIQ 368

  Fly   364 VTSSSSAALPQEPPEADLLHLNDDDEDDHTDNTIIAGNLSG---SSTTSKPRPNVPSDKNIMNLS 425
            ..|.....:..|     :..|.|...|  :.:::.:|..:|   ....|:....:..:|..:. .
 Frog   369 TLSGYMTPIGNE-----MASLTDMRRD--SSSSVGSGEFTGVKELDEISQEIAQLQREKYALE-Q 425

  Fly   426 SISTSSQASNSSKREATP-QNSLGKNRSISNSPNVEKP-----VSGTVSSTASAVDSTNVSSQWT 484
            .|....:|......|... ||.|.:..|.......:|.     :.......|...|..|...|..
 Frog   426 DIREKEEAIRQKSTEVQDLQNDLDRETSTLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKC 490

  Fly   485 KFSESPTTSAVSVQSTTGAAPVVAAGAAASGASSPGLKPVLFDMKRSAQDVVSNPQILHPVPLRV 549
            : .|....|::.:|..:..:.|.|.....:.|.|        ::.|..|:.....|.:....:::
 Frog   491 Q-EEGQMISSLKIQIQSQESDVKAQEEELNRAKS--------ELNRLQQEETQLEQSIQAGRVQL 546

  Fly   550 TPIGTAIASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVAGSSHRDSSDLRA-- 612
            ..|..::.|:.|..|:..|.::|.::|.:.:     |..|......::|..|||..:.||..:  
 Frog   547 ETIIKSLKSTQEEINQARSKLSQLQESQQEL-----NQNSDQYNDALNGDHGSSMNNLSDTESFS 606

  Fly   613 ----------IQRPQAKK----------------------------------------------- 620
                      |:.|...|                                               
 Frog   607 SRERTDHSSTIEDPFKNKSHLFSNNNQDIYSDPFQTEDPFTSDPFKGADPFKSNPFGDDPFKESD 671

  Fly   621 ------------LPAKNSALPPPPQREPSIGS------TGPSESQEPQAAYVASSLASKKEPPPL 667
                        .|||.......|..:.|:.|      :.|.||.:|   :::|:|..||..|  
 Frog   672 PFHAPTSEDPFQKPAKGDPFSADPFTKNSVHSMTLPLKSDPFESSDP---FISSTLPKKKTDP-- 731

  Fly   668 PPPRPHRHARSSSLDLNKFKIGATGGAQQAEITAQASFDMQTSTGFADFTHFADEGAANVVDEQQ 732
                      ..:||    ..|::.              ..::..||||:|.:.:          
 Frog   732 ----------FGTLD----PFGSSA--------------FSSNESFADFSHMSKQ---------- 758

  Fly   733 LHSLPPAAPPPQAAVVPPTRITLQQAQQRVSAFEVYRKPQTPRGSQSPPQQ--PPPPAPAVGLTT 795
             |.    ||.|.:|..|.|..:....:.         |..||   ..||::  ||.|.|..|.:|
 Frog   759 -HQ----APDPFSATFPGTGFSDDPFKS---------KHDTP---ALPPKRSVPPRPKPPSGKST 806

  Fly   796 QTGQLPSA-----------------ESFEKRVT-----------AISDSLRHV-----------S 821
            ...||.::                 :.|:.|.:           |.|.|.:|.           |
 Frog   807 PVSQLSTSHFQKSHDPFQPFGTEPGDPFQSRKSFTDPFSGKDPFATSQSGKHSKGTSAGFANFGS 871

  Fly   822 F-----------KQGQANTTEVLQRLREQNNSLLHLCNDLS 851
            |           ::.|....|.|.||:.|....|.|...||
 Frog   872 FGNEEQQLAWAKRESQRAEKERLDRLKRQEQEDLELAIALS 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 21/82 (26%)
eps15l1XP_012812304.1 EH 17..83 CDD:238009 14/66 (21%)
EH 119..212 CDD:197477 13/92 (14%)
EH 267..363 CDD:197477 24/100 (24%)
COG4372 401..>579 CDD:443500 32/192 (17%)
CCDC158 <404..902 CDD:464943 99/572 (17%)

Return to query results.
Submit another query.