DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment piwi and AGO5

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_850110.1 Gene:AGO5 / 817334 AraportID:AT2G27880 Length:997 Species:Arabidopsis thaliana


Alignment Length:1061 Identity:234/1061 - (22%)
Similarity:397/1061 - (37%) Gaps:304/1061 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QGRGRRRPLNEDDS------------------STSRGSGDGPRVKVFRGSSSGDPRA-------- 43
            :|.|||....:|.|                  |.|.|.|.|   .|.||.::||..|        
plant    16 RGGGRRSDQRQDQSSGQVAWPGLQQSYGGRGGSVSAGRGRG---NVGRGENTGDLTATQVPVASA 77

  Fly    44 -----------DPRIEASRERRAL-------EEAPRREGG---------PTERKPWGDQYDYLNT 81
                       ||....:...:.:       ||:...|..         .||.||     :..:.
plant    78 VSGGRGRGNIGDPTFSVASSSKTVSVASSSKEESKNTEVSETMSNLQITSTETKP-----EMTSL 137

  Fly    82 RPAELVSK---------KGTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIENPRVRMGVLS- 136
            .||.  ||         :||.|..||::.|.|.::. .:..:.||.|...|.:.:..|...|:. 
plant   138 PPAS--SKAVTFPVRPGRGTLGKKVMVRANHFLVQV-ADRDLYHYDVSINPEVISKTVNRNVMKL 199

  Fly   137 -----NHANLLGSGYLFDGLQ-LFTT--RKFEQEITVLS-------GKSKLDIEYKISIKFVGFI 186
                 ..::|.|....:||.: |:|.  ..|:.:..|::       |.|..|..:|:::|.|...
plant   200 LVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKVAVKNVTST 264

  Fly   187 SCAE-PRFL------------QVLNLILRRSMKGLNLELVGRNLFDPRAKIEIREFKMEL----- 233
            ...: .:||            |||:::||..... :...|||:.|......:.|:.:.||     
plant   265 DLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSN-DYVSVGRSFFHTSLGKDARDGRGELGDGIE 328

  Fly   234 -WPGYETSIRQHEKDILLGTEITHK-----VMRTETIYDIMR-RCSHNPARHQDEVRV-NVLDLI 290
             |.||..|:|..:..:.|..:::.:     ::.|:.|...:. |..:.|.|..|.::| .||   
plant   329 YWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDLNRPLRDSDRLKVKKVL--- 390

  Fly   291 VLTDYNNRTYRINDVDFGQTPKSTFSCKG------RDISF----------VEYYLTKYNIRIRDH 339
                   ||.::..:.:..|..:..|  |      |::.|          |:|:..|||.|::..
plant   391 -------RTLKVKLLHWNGTKSAKIS--GISSLPIRELRFTLEDKSEKTVVQYFAEKYNYRVKYQ 446

  Fly   340 NQPLLISKNRDKALKTNASELVVLIP-ELCRVTGLNAEMRSNFQLMRAMSSYT-RMNPKQRTDRL 402
            ..|         |::|.:....|.:| |||::.              ....|| |:|.||.|..|
plant   447 ALP---------AIQTGSDTRPVYLPMELCQID--------------EGQRYTKRLNEKQVTALL 488

  Fly   403 RAFNHRLQNTPESVKVL-----------RDWNMELDKNVTEVQGRIIGQQNIVFH-NGKVPAGEN 455
            :|...|..:...|:|.|           :::.|.:...:..::.|::....:.:| :||......
plant   489 KATCQRPPDRENSIKNLVVKNNYNDDLSKEFGMSVTTQLASIEARVLPPPMLKYHDSGKEKMVNP 553

  Fly   456 ADWQRHFRDQRMLTTPSDGLDRWAVIA---------PQRNSHELRTLLDSLYRAASGMGLR---- 507
            ...|.:..|::|:....  :..|..::         ||....:|..:.     .:.||..:    
plant   554 RLGQWNMIDKKMVNGAK--VTSWTCVSFSTRIDRGLPQEFCKQLIGMC-----VSKGMEFKPQPA 611

  Fly   508 ---IRSPQEFIIYDDRTGTYVRAMDDCVRSDP--KLILCLVPNDNAERYSSIKK-----RGYVDR 562
               |..|.|.|         ..|:.|..:..|  :|::.::| |....|..||:     .|.|.:
plant   612 IPFISCPPEHI---------EEALLDIHKRAPGLQLLIVILP-DVTGSYGKIKRICETELGIVSQ 666

  Fly   563 AV-PTQVVTLKTTKNRSLMSIATKIAIQLNCKLG------------YTPWMIELPLSGLMTIGFD 614
            .. |.||..|    |:..|.   .:|:::|.|.|            ..|.:.:.|   .:.:|.|
plant   667 CCQPRQVNKL----NKQYME---NVALKINVKTGGRNTVLNDAIRRNIPLITDRP---TIIMGAD 721

  Fly   615 IA--KSTRDRKRAYGALIASMDLQQNSTYFSTVTECSAFDVLANTLWPMIAKALRQYQH-----E 672
            :.  :...|...:..|::||||..:.:.|...|:..:..:.:...|:.::....|...|     |
plant   722 VTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIRE 786

  Fly   673 H--------RKLPSRIVFYRDGVSSGSLKQLFEFE---VKDIIEKLKTEYARVQLSPPQLAYIVV 726
            |        .::|.||:|||||||.|...|:...|   ::.....|:..|.      |::.:::|
plant   787 HFIAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYV------PRVTFVIV 845

  Fly   727 TRSMNTRFF--LNGQ--------NPPPGTIVDDVITLPERYDFYLVSQQVRQGTVSPTSYNVLYS 781
            .:..:||.|  .:|.        |..|||:||..|..|..:||||.|....|||..|..|:||..
plant   846 QKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLD 910

  Fly   782 SMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYA-----------------------KKLATL 823
            ..|.:.:::|.||..:|:.|...:.:..:.....||                       :...|.
plant   911 ENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTG 975

  Fly   824 VG---TNLHSIPQNALEKKFY 841
            ||   :.|.:|..|..|..||
plant   976 VGQVISQLPAIKDNVKEVMFY 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 33/153 (22%)
Piwi_piwi-like_Euk 382..826 CDD:240016 121/546 (22%)
AGO5NP_850110.1 PLN03202 131..997 CDD:215631 210/943 (22%)

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