DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and csr-1

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001040938.1 Gene:csr-1 / 177591 WormBaseID:WBGene00017641 Length:1030 Species:Caenorhabditis elegans


Alignment Length:1029 Identity:196/1029 - (19%)
Similarity:353/1029 - (34%) Gaps:329/1029 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GRG---RRRPLNEDDSST--------SRGSGDGPRVKVFRGSSSG------------DPR----- 42
            |||   |||   :|:.|.        :||:..|.    :||.:.|            ||:     
 Worm    91 GRGGYDRRR---DDEESKAENRFGGYNRGANGGN----YRGRTGGSGRGGSTQTTTVDPKYNGLI 148

  Fly    43 ----ADPRIEASRERRALEEAPR------------------------------------------ 61
                |:|:::........::.||                                          
 Worm   149 LENSAEPKLKGLNSDMNQKQNPRLALNIFGLELSERTIFRHVVQMKLIDRQHNKEYILTTMSARG 213

  Fly    62 REGGPTERKPWGDQYDYLNTRPAELVSKKGTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIE 126
            |....|::|   |.:..|:....:..:|||...:|.........|.|. |...:...::.|.::|
 Worm   214 RGNRATKQK---DNFILLDILLKQWAAKKGQQNLPAFAYDGAQSLFTL-EGISLMVDIKKEDALE 274

  Fly   127 NPRVRMGVLSNHANLLGSGYLFDGLQLFTTRKFEQEITVLSGKSKLDIEYKISIKFVGFISC--- 188
            .|.:             |.:|.|            .|:.|||  .|:|..:..::...|:..   
 Worm   275 IPEL-------------SNFLKD------------SISFLSG--DLEISCEPDLEKPSFVQTELN 312

  Fly   189 --AEPRFLQVLNLILRRS----------MKGL-----NLE------------------LVGRN-- 216
              ::|||...|:::..:|          .|||     :||                  :||.|  
 Worm   313 EWSDPRFYAYLDIVTSQSAIRSERYLSQSKGLYVHTQSLEELRVKWAVAAKGIHKGCRIVGANGP 377

  Fly   217 ----LFDPR-----AKIEIREFKMELWPGYETSIRQHEKDILLGTEITHKVMRTETIYDIMRRCS 272
                ..||:     |.|.:.:.....:|      |....:.::...:  |:.|...:  :::...
 Worm   378 LPILELDPQSTQYYASIPLSQMLQYAFP------RDFPPNRIVNPNM--KLQRAVKL--LLKDLK 432

  Fly   273 HNPARHQDEVRVNVLDLIVLTDYNNRTYRINDVDFGQTPKSTFSCKGRDISFVEYYLTKYNIRIR 337
            .||  :.|:.::          :...|..::|||:.......|..|..::.|             
 Worm   433 CNP--YYDDKQI----------WATNTITVSDVDYNAPKDPEFRQKYPNLKF------------- 472

  Fly   338 DHNQPLLISKNRDKALKTNASELVVLIP-ELCRV---TGLNAEMRSNFQLM-RAMSSYTRMNPKQ 397
                |:|      .|::........|:| |..:|   ..::..:...|:|. ||.:...|.:..|
 Worm   473 ----PML------PAVQCGTGPHKRLMPLEYLKVLPYQSIDRRVLEEFELTPRANAPNERWSTLQ 527

  Fly   398 RTDRLRAFNHRLQNTPESVKVLRDWNMEL----DKNVTEVQGRIIGQQNIVFHNGKVPAGENADW 458
            :......||.         :|::|:.:::    ..||:|:.|..:...::.:.:......|..||
 Worm   528 KHYDQFGFND---------QVMKDFGVQICNDPFNNVSEIDGERVLAPSVAYADPVHVDDEKRDW 583

  Fly   459 QRHFRDQRMLTTPSDGLDRWAVIAPQRNSHE-----LRTLLDSLYRAASGMGLRI---------- 508
            :.  :|::.:|..:.....:.::|....:.:     .:.:..:..:.....|:.|          
 Worm   584 KA--QDKKFVTPATIDHLMFVLVAGYTRTWDADCDATKFVAKAFMQRCKDKGMHIGSYSMDQHNG 646

  Fly   509 -RSPQEFII-----------YDDRTGT-YVRAMDDCVRSDPKLILCLVPNDNAERYSSIKKRGYV 560
             |..:.|:.           |.|.:.| :|..:.|.|   |.:..||   ...||.|.|      
 Worm   647 ERGSENFLTSVFKNLVTHPNYRDSSFTPFVLFISDDV---PNIHECL---KFEERMSDI------ 699

  Fly   561 DRAVPTQVVTLKTTK-------------NRSLMSIATKIAIQLNCKLGYTPWMIELPLS------ 606
                |||.|.||..|             .|:.......|.::.|.|.|...:..::|..      
 Worm   700 ----PTQHVLLKNVKKMRDNIEKKSQGGRRAYDLTLDNIVMKANIKCGGLNYTADIPRDLACWNE 760

  Fly   607 -GLMTIGFDIAKSTRDRKRAYGALIASMDLQQNSTYFSTVTECSAFDVLANTLWPMIAK-----A 665
             ....||.|:|...|:..|........:........:|.:.:....|.....:...|.:     :
 Worm   761 VSTFVIGMDVAHPDRNAAREGNPSTVGLSCNSAENPYSFIGDFLYTDPRREAIQDEILRKFTDQS 825

  Fly   666 LRQYQHEHRKLPSRIVFYRDGVSSG----SLKQLFEFEVKDIIEKLKT--------EYARVQLSP 718
            :|.:. |.|..|.:::.:|||||.|    :||     ||:.|.:.:||        :||      
 Worm   826 VRNFA-EIRGFPKKVIIFRDGVSFGEETAALK-----EVEIIEQTIKTAAKSMGHSDYA------ 878

  Fly   719 PQLAYIVVTRSMNTRFFLNGQ-------NPPPGTIV-DDVITLPERYDFYLVSQQVRQGTVSPTS 775
            |::..|||.:..:|||:..|.       ||.|.|.| .|:....:|..|....:.| |||....|
 Worm   879 PKVLAIVVKKRHHTRFYAKGGHHGNMPINPLPDTSVGGDIAEYGKRQIFIQAFRPV-QGTAKVPS 942

  Fly   776 YNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYAKKLATLVGTNLH 829
            :.|:.....:|.|.:.|:...:|.|:...:..|.:|.....|.:||.. ||.|:
 Worm   943 FLVIRDDEEVSDEHVAKMVCAVCSLHQLVNSPTSIPTPVYVAHELAKR-GTGLY 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 22/138 (16%)
Piwi_piwi-like_Euk 382..826 CDD:240016 109/521 (21%)
csr-1NP_001040938.1 PAZ_argonaute_like 361..497 CDD:239212 27/180 (15%)
Piwi-like 555..993 CDD:239208 100/469 (21%)

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