DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and hrde-1

DIOPT Version :9

Sequence 1:NP_001285825.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_497834.1 Gene:hrde-1 / 175535 WormBaseID:WBGene00007624 Length:1032 Species:Caenorhabditis elegans


Alignment Length:655 Identity:147/655 - (22%)
Similarity:246/655 - (37%) Gaps:155/655 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 RRCSHNPARHQDEVRVNVLDLIVLTDYNNRTYRINDVDFGQTPKSTFSCKG----RDISFVEYYL 329
            :||.....:..|         :..|.......|::.:.......::|..|.    |:::..||:|
 Worm   391 KRCIEEALKGLD---------VECTHLKGNLIRVSSIAENNAENTSFMMKDDKGEREVTVAEYFL 446

  Fly   330 TKYNIRIRDHNQPLLISKNRDKALKTNASELVVLIP-ELCRV-----------TGLNAEMRSNFQ 382
            .:|||:::....||::|| |.|.......||:.:.| :..:|           ||.||.|..:. 
 Worm   447 LQYNIKLKYPRLPLVVSK-RFKHESFFPMELLRIAPGQRIKVNKMSPTVQSAMTGRNASMPQHH- 509

  Fly   383 LMRAMSSYTRMNPK-QRTDRLRAFNHRLQNT-----------PESVK---------VLRDWNMEL 426
             ::.:....|.|.| ::...:.||..:|.:|           |..:|         :.|......
 Worm   510 -VKLVQDILRDNLKLEQNKYMDAFGIKLMSTEPIQMTAKLLPPAQIKFKGQTYMPDMSRPAFRTQ 573

  Fly   427 DKNVTEVQGRIIGQQNIVFHN--GKVPAGENADWQRHFRDQRMLTTPSDGLDRWAVIAPQRNSHE 489
            ||.|...:.|.||  .:||.|  ....|.:..|...:|.....:|...|..| |::  .:.||.:
 Worm   574 DKFVEPARIRKIG--IVVFDNCIQMRQAEDFCDKLSNFCRDNGITVEKDSRD-WSI--RELNSSD 633

  Fly   490 LRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCVRSDPKLILCLVPNDNAERYSSI 554
             ...:.:|.:                          :.:||  |.|   ||..:..:.......|
 Worm   634 -SVAIQNLMK--------------------------KWLDD--RVD---ILVGIAREKKPDVHDI 666

  Fly   555 KKRGYVDRAVPTQVVTL------KTTKNRSLMSIATKIAIQLNCKLGYTPWMIELP--------- 604
            .|  |.:.::..|.:.|      |....:........:..:.|.|.|.|.:.:|:|         
 Worm   667 LK--YFEESIGLQTIQLCQQTVDKMMGGQGGRQTIDNVMRKFNLKCGGTNFFVEIPNAVRGKAVC 729

  Fly   605 ----------LSGLMTIGFDI----AKSTRDRKRAYGALIASMDLQQN----STYFSTVTECSAF 651
                      |..:..|||:|    :::..||.|      :.||.:.:    |...:..|:...|
 Worm   730 SNNETLRKKLLEHVQFIGFEISHGASRTLFDRSR------SQMDGEPSVVGVSYSLTNSTQLGGF 788

  Fly   652 DVL-------ANTLWPMIAKALRQYQHEHRKLPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKT 709
            ..|       ...|.....|.:|.|:...:.||:|||.||.|...|:..:     ||:.:|:::.
 Worm   789 TYLQTQKEYKLQKLDEFFPKCVRSYKEHSKTLPTRIVIYRVGAGEGNFNR-----VKEEVEEMRR 848

  Fly   710 EYARVQLSP---PQLAYIVVTRSMNTRFF---LNG-----QNPPPGTIVDDVITLPERYDFYLVS 763
            .:.::|  |   |.|..|:..|:.:.|.|   ::|     ||.|.||.|::|:|.....:|.|.|
 Worm   849 TFDKIQ--PGYRPHLVVIIAQRASHARVFPSCISGNRATDQNIPSGTCVENVLTSYGYDEFILSS 911

  Fly   764 QQVRQGTVSPTSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYAKKLATLVGTNL 828
            |....|||.|..|.:|.:....|..::..|||.....:........||.|...|:.||.. |.|.
 Worm   912 QTPLIGTVRPCKYTILVNDAKWSKNELMHLTYFRAFGHQVSYQPPSVPDVLYAAENLAKR-GRNN 975

  Fly   829 HSIPQ 833
            :.|.|
 Worm   976 YKIHQ 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_001285825.1 ArgoN 91..201 CDD:293095
PAZ 262..396 CDD:198017 31/142 (22%)
Piwi_piwi-like_Euk 382..826 CDD:240016 114/517 (22%)
hrde-1NP_497834.1 DUF1777 315..>379 CDD:285811
PAZ_argonaute_like 389..480 CDD:239212 22/98 (22%)
ArgoL2 517..556 CDD:293097 8/38 (21%)
Piwi-like 540..974 CDD:239208 108/486 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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