DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment piwi and vsra-1

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001417601.1 Gene:vsra-1 / 172816 WormBaseID:WBGene00007297 Length:946 Species:Caenorhabditis elegans


Alignment Length:954 Identity:187/954 - (19%)
Similarity:333/954 - (34%) Gaps:246/954 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PRVKVFRGSSSGDPRADPRIEASRERRALEEAPRREGGPTERKPWGDQYDYLNTRPAELVSKKGT 92
            |..::.|.|.|.:|.....||        :..|.    |...||   .::|......|.::|   
 Worm    37 PTPELSRVSVSSNPPTPSAIE--------KPVPL----PVPSKP---LFEYEPPAQLEALAK--- 83

  Fly    93 DGVPVMLQTNFFRLKTKPEWRIVHYHV----EFEPSIENP----------RVRMGVLSN----HA 139
             ..||.:.||.:.|:.||. .:..|.|    .|:.|..:|          |.|...|:.    ..
 Worm    84 -NKPVKVTTNSYELELKPT-PVFRYDVSVLKSFDDSTRDPIELAGSKGGDRQRQADLTEIVKVAL 146

  Fly   140 NLLGSGYL---FDG-LQLFTTRKFE------QEITV--------------------LSGKSKLDI 174
            .|.|.|.|   :|| ..||||:|||      |.|.:                    .|||..:.|
 Worm   147 TLEGLGNLNIFYDGAAMLFTTQKFETKTEKQQAIFMPIPSDHPKLSTSLKESQFGRASGKFHVSI 211

  Fly   175 EYKISIKFVGFISCAEPRF-------LQVLNLILRRSMK--GLNLELVGRNLFDPR-AKIEIREF 229
            |.......:..|.....|.       .|:..:.|....|  |..:...|..|||.: .:..|.:.
 Worm   212 ELNSKQSELNTIDLLNERLDSAACPVTQMAQIALSAEAKQNGFIILDGGHELFDQKNTRRTIGKD 276

  Fly   230 KMELWPGYETSIRQHEKDILLGTEITHKVM--------RTETIYDIMRRCSHNPARHQDEVRVNV 286
            .:|...|...||:..:.:...|:  .|.||        :|..:.|:::..:.|      ::|..:
 Worm   277 GVEDMDGVAASIKMAQGNKKTGS--AHLVMDYKKKQFFKTGPLKDLIKGINPN------QLRSYL 333

  Fly   287 LDLIVLTDYNNRTY---RINDVDFGQ------------------TPKSTFSC------------- 317
            ..|.|.|.|::::.   .|::|..|:                  .|||.|..             
 Worm   334 KGLRVHTTYSHQSIFIDGISNVPIGEIKLPDGTPLLDDCARVSGKPKSFFDASKPAVQVNQYNKR 398

  Fly   318 KGRDISF---VEYYLTKYNIRI-RDHNQPLLISKNRDKALKTNASELVVLIPELCRVTGLNAEMR 378
            :||.:.:   :|..|.|.|.:: ::|.:|       .:::|          |||           
 Worm   399 EGRRMVYSFPIENLLVKPNQKLTQNHGEP-------PRSIK----------PEL----------- 435

  Fly   379 SNFQLMRAMSSYTR-MNPKQRTDRLRAFNHRLQNTPESVKVLRDWNMELDKNVTEVQGRIIGQQN 442
             .|.|:|.:....: ::|.|                    .|:...:.::.....|:...:.:..
 Worm   436 -RFDLIRKVGESAKLLSPNQ--------------------TLKSIGIAINPEPIVVEAMTVPKPT 479

  Fly   443 IVFHNGKVPAGE---NADWQRHFRDQRML----TTPSD--------GLDRWAVIAPQRNSHELRT 492
            |::.:|...:.:   ...|....|:.:.|    ..|..        ....::..:|:....||::
 Worm   480 ILYKDGAFTSPDLLNRTSWDVQARNHQSLKGGFVEPMKINKILILYNSQSYSQASPKEAVVELQS 544

  Fly   493 LLDSLYRAASGMGLRI-RSPQEFIIYDDRTGTYVRAMDDCVRSDPKLILCLVPNDNAERYSSIKK 556
            :|.   :.|..:|:.| :...|.:...|..|.....|.....|..|.|:....:.:...:|::|.
 Worm   545 ILS---KKAKDVGMTIGQIDVEDLNDPDIIGAIENKMTILKTSQVKPIVIYADHTSEGTHSTLKL 606

  Fly   557 RGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCKLGYTPWMIEL---------PLSGLMTIG 612
            :..:...:..||...|:.|.......|..:.::||.|.|.....:.:         ..|..:.|.
 Worm   607 QERLCEVITQQVALDKSLKRTPGKVTANNLLMKLNLKYGGVNHKVRVDNSISHLWGDTSNTLIIS 671

  Fly   613 FDIAKSTRDRKRAYGALIASMDLQQNST---YFSTVTEC-SAF-----------DVLANTLWPMI 662
            :|:..|:       |.:....::....:   :....|.| .||           :.:...|..:.
 Worm   672 YDVCHSS-------GKVYKKDEICDEPSCVGFGFNGTACPEAFIGDFHYQLPRHEQVDEHLLKLR 729

  Fly   663 AK-ALRQYQHEHRKLPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKTEYARVQLSPPQLAYIVV 726
            |: .|..|....:|.|.::|..|||||.|..|.:...|.:.|.:.:...:...:...|..|.:||
 Worm   730 ARFMLNHYITSRKKYPQQVVILRDGVSEGQHKMVRNEEFQAIKQSIMNVFNEKKAKAPSFALLVV 794

  Fly   727 TRSMNTRFFLNGQ------NPPPGTIVDDVITLPERYDFYLVSQQVRQGTVSPTSYNVLYSSMGL 785
            |:....|..:..|      |.||.|.:|..|...:..:...||.....||..|...|.|.:. |:
 Worm   795 TKRHANRLLIKDQNVSGYTNVPPLTAIDQTIVKKQGNEVIFVSHCPLNGTAQPIVINTLVND-GI 858

  Fly   786 --SPEKMQKLTYKMCHLYYNWSGTTRVP----AVCQYAKKLATL 823
              :.:::.:....:|..:...:....:|    |..:|||:.|.|
 Worm   859 FKTNDQLVQFITALCCAHQKSTNIVSLPESIYAADEYAKRGADL 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 29/172 (17%)
Piwi_piwi-like_Euk 382..826 CDD:240016 91/496 (18%)
vsra-1NP_001417601.1 PRK12323 <13..231 CDD:481241 51/213 (24%)
Piwi 589..904 CDD:214930 66/322 (20%)

Return to query results.
Submit another query.