DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and ppw-1

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_491323.2 Gene:ppw-1 / 172013 WormBaseID:WBGene00004093 Length:887 Species:Caenorhabditis elegans


Alignment Length:898 Identity:186/898 - (20%)
Similarity:329/898 - (36%) Gaps:248/898 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 REGGPTERKPWGDQYDYLNTRPAELVSKKGTD---GVPVMLQTNFFRLKTKPEWRIVHYHVEF-- 121
            |...|..:|        |.|.|  |.:||..:   |..|.:.||..:|..||...|..|.|:.  
 Worm    13 RPAAPAAQK--------LGTAP--LAAKKTRNVERGTKVNIDTNIRKLTIKPNQPIYKYAVQVNY 67

  Fly   122 --------EPSIE------------NPRVRMGVLSNHA-----NLLGSGYLFDGLQ--LFTTRKF 159
                    |.:||            |.:.|...:.|.|     .|...|..|...|  |:|..|.
 Worm    68 VFRKPDGTEATIEMSKSAKKGTEHDNDKTRCQKVYNEAIKRYDELKTGGPFFYDRQASLYTLTKL 132

  Fly   160 EQEIT--VLSGK--------------SKLDIEYKIS----IKFVGFISC---AEPRFLQVLNLIL 201
            :.|..  |::.|              .|:|..::.:    |:...  ||   |:...|:.:|:|:
 Worm   133 KNESISFVVTDKICKRQNFKEAQFVLKKVDQSFQSTSNDVIRTTN--SCPANADKTLLEAMNIIV 195

  Fly   202 R-RSMKGLNLELVG---RNLFDPR-AKIEIREF-KMELWPGYETSIRQHEKDI--LLGTE--ITH 256
            . .:.:..|:..||   ..|.||. ..:..:|: :.:|:.|...|     |.:  |.||:  :..
 Worm   196 SGPAFENKNVITVGACVHYLIDPTVVDVAYKEYAEGQLYSGVGAS-----KSVKTLEGTDKKVPS 255

  Fly   257 KVMRTE---TIY--------DIMRRC--------SHNPARHQDEVRVNVLDLIVLTDYN------ 296
            ..|.||   |::        ::::..        :::||..:.|.....||:::  :|.      
 Worm   256 LFMTTEMKTTLFHPDYAPLVELLQTFRGFSTTLKANSPAAQRIEKAFVGLDVVL--NYGVHKGLG 318

  Fly   297 --------NRTYRINDVDFGQTPKSTFSCKGRDISFV-EYYLTKYNIRIRDHNQPLLISKNRDKA 352
                    .|.:........:..|||     |:.:.| :|:..||.|.::..:...:.:|.:...
 Worm   319 EDGVVMKIRRFHTSAKETCFEVEKST-----REFTNVFDYFKKKYGITLKYPDLFTIEAKGKQGK 378

  Fly   353 LKTNASELVVLIPELCRVTGLNAEMRSNFQL----MRAMSSYTRMNPKQRTDRL-RAFNHRLQNT 412
            :...| |:::|.|   ..|..|.:|.:|.|.    |.|...:.|   |..||.: |.......|.
 Worm   379 IHFPA-EVLLLCP---NQTVTNDQMINNEQADMIKMSAAQPHIR---KTTTDTIVRNVGLASNNI 436

  Fly   413 PESVKVLRDWNMELDKNVTEVQGRIIGQQNIVFHNGKVPAGEN------ADWQR--HFRDQRMLT 469
            ...:||....|:|         |.::.:..|.|...::....|      .|:.|  .:.|.:.||
 Worm   437 YGFIKVEDPVNLE---------GMVLPKPKIAFAGNQLADLANPKSRFPTDFNRAGQYYDAKELT 492

  Fly   470 TPSDGLDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSP-QEFIIYDDRTGTYVRAMDDCVR 533
                   :|.::..|  :.|::.|...|.......|::..:| ..|||..|....:.:|     :
 Worm   493 -------KWELVFVQ--NEEVQGLAKQLADEMVNNGMKCSNPTMSFIIRGDLEPIFKKA-----K 543

  Fly   534 SDPKLILCLVPNDNAERYSSIK--KRGYVDRAVPTQVVTLKTTKN-----RSLMSIATKIAIQLN 591
            :....:|..|.......:..||  ::.|   .|.||.:..:|.:.     ::.::|..|    .|
 Worm   544 AAGTQLLFFVVKSRYNYHQQIKALEQKY---DVLTQEIRAETAEKVFRQPQTRLNIINK----TN 601

  Fly   592 CKLGYTPWMI-------------------------ELPLSGLMTIGFDIAKSTRDRKRAYGALIA 631
            .|||...:.|                         :.|:|    :||........:|.|.|.:..
 Worm   602 MKLGGLNYAIGSEAFNKPNRLIVGFVTSQRVGGNPDYPIS----VGFAANMLKHHQKFAGGYVYV 662

  Fly   632 SMDLQQNSTYFSTVTECSAFDVLANTLWPMIAKALRQYQHEHRKLPSRIVFYRDGVSSGSLKQL- 695
            ..|    ...|.:        ::.:||     .|:.:...|.|..|..|:.|.:|||.|....: 
 Worm   663 HRD----RDVFGS--------IIKDTL-----LAIFKTCTEQRGRPDDILLYFNGVSEGQFSMIN 710

  Fly   696 --FEFEVKDIIEKLKTEYARVQLSP---PQLAYIVVTRSMNTRFFLNGQ----NPPPGTIVDDVI 751
              |...||:.....:.|.     :|   |.:..|..:::.|.|.:.:.:    |..|||:||..|
 Worm   711 EEFSARVKEACMAFQKEG-----TPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTI 770

  Fly   752 TLPERYDFYLVSQQVRQGTVSPTSYNVLYSSMGLSPE-----KMQKLTYKMCH 799
            ......::|..|...||||...|.:.:::::.. .|:     .:::||..:|:
 Worm   771 VSNVYTEWYHASAVARQGTAKATKFTLIFTTKA-GPQAEPLWHLEQLTNDLCY 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 31/171 (18%)
Piwi_piwi-like_Euk 382..826 CDD:240016 98/479 (20%)
ppw-1NP_491323.2 PAZ_argonaute_like 272..389 CDD:239212 19/124 (15%)
Piwi-like 444..849 CDD:239208 87/436 (20%)

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