DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and ago4

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_004911629.1 Gene:ago4 / 100495218 XenbaseID:XB-GENE-1006882 Length:890 Species:Xenopus tropicalis


Alignment Length:872 Identity:197/872 - (22%)
Similarity:348/872 - (39%) Gaps:220/872 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIENPRVRMGVLSNHAN-----LLGS---GYL 147
            ||.|.|:.|..|.|:::. |:..:.||.|:.:|.....||...|:.....     :.|.   || 
 Frog    49 GTLGKPIRLLANHFQVQI-PKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMPIFGDRQPGY- 111

  Fly   148 FDGLQ-LFTTR-------KFEQEITVLSGKSKLDIEYKISIKFV-------------GFISCAEP 191
             ||.: ::|..       :.:.|:| |.|:.| |..:|::|::|             |.:|....
 Frog   112 -DGKRNMYTAHPLPIGRDRVDLEVT-LPGEGK-DQTFKVTIQWVSVVSLQLLLEALAGHLSEVPD 173

  Fly   192 RFLQVLNLILRRSMKGLNLELVGRNLFDP-----------RAKIEIREFKMELWPGYETSIRQHE 245
            ..:|.|::|.|. :..:....|||:.|.|           |          |:|.|:..|:|...
 Frog   174 DSVQALDVITRH-LPSMRYTPVGRSFFSPPEGYYHPLGGGR----------EVWFGFHQSVRPAM 227

  Fly   246 KDILLGTEITHKVM-RTETIYDIMRRCSHNPARHQDEVRVNVLDL-------IVLTDYN------ 296
            .:::|..:::.... |.:.:.:.|  |             .|||:       ..|||..      
 Frog   228 WNMMLNIDVSATAFYRAQPVIEFM--C-------------EVLDVQNINEQTKPLTDSQRVKFTK 277

  Fly   297 ---------------NRTYRINDVDFGQTPKSTF-----SCKGRDISFVEYYLTKYNIRIRDHNQ 341
                           .|.||:.:|........||     :.:..:.:..:|:..||:::::..:.
 Frog   278 EIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKYPHL 342

  Fly   342 PLLISKNRDKALKTNASELVVLIP-ELCRVTGLNAEMRSNFQLM-RAMSSYTRMNPKQRTDRLRA 404
            |         .|:....:....:| |:|.:.   |..|...:|. ...|:..:...:...||...
 Frog   343 P---------CLQVGQEQKHTYLPLEVCNIV---AGQRCIKKLTDNQTSTMIKATARSAPDRQEE 395

  Fly   405 FNHRLQNTPESV----KVLRDWNMELDKNVTEVQGRIIGQQNIVFHNGKVPAGENADWQRHFRDQ 465
            .: ||..:...|    ..|:::.:.:...:||:.||:: ...::.:.|:|             ..
 Frog   396 IS-RLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVL-PAPMLQYGGRV-------------SN 445

  Fly   466 RMLTTPSDG--------------LDRWAV--IAPQRNSHE--LRTLLDSLYRAASGMGLRIRSPQ 512
            :.:.||:.|              :..|||  .|||:...|  |::..|.|.:.:...|:.|:...
 Frog   446 KTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQP 510

  Fly   513 EFIIYDDRTG-----------TYVRAMDDCVRSDPKLILCLVPNDNAERYSSIKKRGYVDRAVPT 566
            .|..|.....           |||..         :||:.::|. ....|:.:|:.|.....:.|
 Frog   511 CFCKYAQGADSVEPMFKHLKLTYVGL---------QLIVVILPG-KTPVYAEVKRVGDTLLGMAT 565

  Fly   567 QVVTLKTTKNRSLMSIATKIAIQLNCKLG---------YTPWMIELPLSGLMTIGFDIA--KSTR 620
            |.|.:|.....|..:: :.:.:::|.|||         ..|.:.:.|   ::.:|.|:.  .:..
 Frog   566 QCVQVKNVVKTSPQTL-SNLCLKINAKLGGINNVLVPHQRPSVFQQP---VIFLGADVTHPPAGD 626

  Fly   621 DRKRAYGALIASMDLQQNSTYFSTV-TECSAFDVLANTLWP---------MIAKALRQYQHEHRK 675
            .:|.:..|::.||| ...|.|.:|| .:.|..:.....|:.         |:.:.|.|:....|.
 Frog   627 GKKPSIAAVVGSMD-GHPSRYCATVRVQTSRQETTQELLYSQEVIQDLSNMVRELLIQFYKSTRF 690

  Fly   676 LPSRIVFYRDGVSSGSLKQLFEFEVKDIIE---KLKTEYARVQLSPPQLAYIVVTRSMNTRFFL- 736
            .|:||::||.|||.|.:||:...|:..|.:   .|:.:|.      |.:.||||.:..:||.|. 
 Frog   691 KPTRIIYYRGGVSEGQMKQVAWPELMAIRKACISLEEDYR------PGITYIVVQKRHHTRLFCA 749

  Fly   737 -------NGQNPPPGTIVDDVITLPERYDFYLVSQQVRQGTVSPTSYNVLYSSMGLSPEKMQKLT 794
                   ...|.|.||.||..||.|..:||||.|....|||..|:.|.||:.....:.:::|.||
 Frog   750 DKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADELQLLT 814

  Fly   795 YKMCHLYYNWSGTTRVPAVCQYAKKLA 821
            |::||.|...:.:..:||...||:.:|
 Frog   815 YQLCHTYVRCTRSVSIPAPAYYARLVA 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 26/168 (15%)
Piwi_piwi-like_Euk 382..826 CDD:240016 124/506 (25%)
ago4XP_004911629.1 ArgoN 53..182 CDD:465134 31/133 (23%)
ArgoL1 193..243 CDD:462567 12/59 (20%)
PAZ_argonaute_like 244..364 CDD:239212 22/143 (15%)
Piwi_ago-like 411..848 CDD:240015 117/466 (25%)

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