DRSC/TRiP Functional Genomics Resources

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Protein Alignment YL-1 and vps72b

DIOPT Version :10

Sequence 1:NP_609475.1 Gene:YL-1 / 34516 FlyBaseID:FBgn0032321 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_009290675.1 Gene:vps72b / 795272 ZFINID:ZDB-GENE-100922-13 Length:374 Species:Danio rerio


Alignment Length:379 Identity:144/379 - (37%)
Similarity:202/379 - (53%) Gaps:52/379 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYE-QKDEEEDVVDSDFSIDEND 64
            :|.||:.|..|||:::.||:.||||:||||:||||.::..|:||: ...|.||.|||||.|||.|
Zfish     3 LAFSRAPRKTAGNRMSRLLDAEEEDEFYKTTYGGFHDESGDEEYKGDLTETEDEVDSDFDIDEGD 67

  Fly    65 EPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETK--ATPALHKKRPGGGVTKRRPRPRFTVLD 127
            ||.|:|||...:::.|  |.||||||....|:::.|  ....|.::.....:.|..| |.... |
Zfish    68 EPDSEQEEDGPRRKSR--VVTKAYKEPVKVVRQKPKQRKLAELPRRTDKTKIDKYNP-PELQD-D 128

  Fly   128 SGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKF 192
            ..|||:|.||...|:.|.:||:|...| .|::|..|.|..: ||.|||.|||:|.|.|.:|||.:
Zfish   129 INRKSVRQSTTEHTRLTYLRLQERQVA-PRRRKGTRHERPL-TQAELLAEAKVTAEINLRSLENY 191

  Fly   193 QKMELEKKKSRPTKRTFSGPTIRYHSLTMP--------------------AMRKP---------- 227
            :::|.:||:....||...|..|||||:.||                    |.:.|          
Zfish   192 ERLEADKKRQVHMKRQCVGSVIRYHSVLMPLVSDVTLKEENVDVEGLDQDAQQNPHLPQALSQSE 256

  Fly   228 -TRGANPAVDSKDLAG---KCERTFVTIENDFNDKVFQSLFRHKAPPKAS-NGICPITRLPARYF 287
             |..|.|.|...:.|.   ||.||::|..   :|:.||.:|.....|:.. ..:||:|..||.|.
Zfish   257 STLSAAPGVPFTNTAAVNTKCSRTYITFS---DDESFQRVFPQSPAPRVPVQEVCPVTHKPALYR 318

  Fly   288 DPITQQPYYSIQAFKILREAYYMQLEQQG---GGSEQP--ELAKWLEWRKLVKE 336
            ||||..||.::|||:|:||||...:...|   .|...|  ..||.|:.:.::|:
Zfish   319 DPITDIPYANVQAFRIIREAYKKYVAAHGLPCTGPSTPADTTAKSLKQKIIIKQ 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YL-1NP_609475.1 YL1 5..218 CDD:461734 94/215 (44%)
YL1_C 276..304 CDD:198061 15/27 (56%)
vps72bXP_009290675.1 YL1 7..217 CDD:461734 94/215 (44%)
YL1_C 307..335 CDD:462412 15/27 (56%)

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