DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and SDG37

DIOPT Version :9

Sequence 1:NP_001260366.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_849969.2 Gene:SDG37 / 816300 AraportID:AT2G17900 Length:485 Species:Arabidopsis thaliana


Alignment Length:488 Identity:112/488 - (22%)
Similarity:183/488 - (37%) Gaps:97/488 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PVCGRYLVAKGAIRGHGLLIEELPFAVGP-KCNGPVVCLGCYEPNPDPEEELCSECG--WPLCVE 79
            |..||.|......|...:::.:.|:...| ..:....|.||::.|   ..:.||.|.  | .|..
plant    24 PQKGRSLFTARDFRPGEVILSQKPYICVPNNTSSESRCDGCFKTN---NLKKCSACQVVW-YCGS 84

  Fly    80 CAQQADNAHFRLECSQLK--DARARFFRLPSGSRHCPQLDCIMPLRVLLAKEANPERWDNEVAPM 142
            ..|:::....|.||..|.  :...|.|..|:             :|:::.........:.:|.|:
plant    85 SCQKSEWKLHRDECKALTRLEKEKRKFVTPT-------------IRLMVRLYIKRNLQNEKVLPI 136

  Fly   143 EHHKEERQRDADVWHADRVNIAQYLRGPCQLANRFSEELIMQVVGV-----------LEVNAF-- 194
            .........:|.|.|...::..|.|. ..|:||..:  ||:|...|           ...||.  
plant   137 TTTDNYSLVEALVSHMSEIDEKQMLL-YAQMANLVN--LILQFPSVDLREIAENFSKFSCNAHSI 198

  Fly   195 ---EARSPKGYPLRCLFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEGQPLHHSYTYTL 256
               |.| |:|..   |||...|:.|:|.||   ::...|.....:|||.::.:...:..||..|.
plant   199 CDSELR-PQGIG---LFPLVSIINHSCSPN---AVLVFEEQMAVVRAMDNISKDSEITISYIETA 256

  Fly   257 DGTAQRQKHLKQGKFFTCQCERCLD---PTEL-------GTHFSSLKCGQCAEGFQVPRQPTEPD 311
            ..|..|||.||:...|.|||.||.:   |.::       |...::.||    .||.: |.|.|  
plant   257 GSTLTRQKSLKEQYLFHCQCARCSNFGKPHDIEESAILEGYRCANEKC----TGFLL-RDPEE-- 314

  Fly   312 TSWNCANCGSDTSNADALAMLQSLQSEVNAVQALPMAAKRLEEIERLLRKYKS-------LLHPL 369
            ..:.|..|....|..:    ::.|.|::..|......:...|:.:..:..||:       |.|..
plant   315 KGFVCQKCLLLRSKEE----VKKLASDLKTVSEKAPTSPSAEDKQAAIELYKTIEKLQVKLYHSF 375

  Fly   370 HFIATGLRQLLIEMYGRVQGYEMVQLPDHQLERKA-ELCRQVLRVLNTFEPGLSRTRAMNLYELH 433
            .......|:.|::|           |.|.::.|:| ..||.::.|.....|.......:..|   
plant   376 SIPLMRTREKLLKM-----------LMDVEIWREALNYCRLIVPVYQRVYPATHPLIGLQFY--- 426

  Fly   434 VPLVLLAKSGFIAGKLKGGELRARLVDAIDLLK 466
                ...|..::.|:.|  |..:.|:.|.|:|:
plant   427 ----TQGKLEWLLGETK--EAVSSLIKAFDILR 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_001260366.1 SET <207..252 CDD:250181 12/44 (27%)
SDG37NP_849969.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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