DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and Smyd4-1

DIOPT Version :10

Sequence 1:NP_609464.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:517 Identity:96/517 - (18%)
Similarity:164/517 - (31%) Gaps:182/517 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRYLVAKGAIRGHGLLIEELPFAVGP--------KC-----NGPVVCLGCYEPNPDPEEELCSEC 72
            |||:|||.||....::..|......|        :|     :.|:.|..|::             
  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQ------------- 277

  Fly    73 GWPLCVECAQQADNAH---FRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLLA------- 127
               ..|.|:::...||   .:.||:..:....|..    |..|       :.||:||.       
  Fly   278 ---RVVYCSRKCREAHSAIHKFECAAYRKDILRLL----GISH-------LALRLLLTYIPYIRP 328

  Fly   128 --KEANPER--WDNEVAPMEHHKEERQR------------------DADV-WHADRVNIAQ-YLR 168
              :|....:  |: |:..:....||.:.                  |.:: :|....|:.| ||:
  Fly   329 HLQEMTSAKGMWE-EIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLK 392

  Fly   169 GPCQLANRFS-------------EELIMQVVGVLEVNAF-------EARSPKGY----------- 202
            ......::|.             ..||::..|.|..|..       ....||.:           
  Fly   393 EHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKP 457

  Fly   203 ---------------PLRCL-FPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEGQPLHHS 251
                           |:..: .||..:..|.|.|:.....   :|..:...|..|:.||:.:.:.
  Fly   458 RHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKF---DGCSVVNYAAKDILEGEEIFNC 519

  Fly   252 YT--YTLDGTAQRQKHLKQGKFFTCQCERC--LDPTELGTHFSSLKCGQ--CAEGFQVPRQPTEP 310
            ||  |......||...||....|.|.|.:|  .||.:....|...:|.:  |.:.|....:..:.
  Fly   520 YTMDYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQN 584

  Fly   311 DTSW----------NCANC-------------GSDTSNADALAMLQSLQSEVNAVQALPMAAKRL 352
            :..|          .|..|             |...|:||:           :..|||   .|..
  Fly   585 NLRWWLRCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADS-----------SKRQAL---FKAF 635

  Fly   353 EEIERLLRKYKSLLHPLHFIATGLRQLLIEMYGRVQGYEM---VQLPDHQLERKAELCRQVL 411
            :::::.|..:.|           |::::.|.......||:   ..|.:.:.|..|.:.|:.|
  Fly   636 DDLDKWLVDHHS-----------LKRIMAEELVTACFYEIDGGTSLDEFEYEDLARIIRKQL 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_609464.1 SET_SMYD <192..279 CDD:380997 24/122 (20%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 9/25 (36%)
zf-MYND 258..298 CDD:460312 8/55 (15%)
SET <359..549 CDD:394802 35/192 (18%)

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