DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-3 and smyd2

DIOPT Version :10

Sequence 1:NP_609464.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_002934751.2 Gene:smyd2 / 100495522 XenbaseID:XB-GENE-985583 Length:430 Species:Xenopus tropicalis


Alignment Length:294 Identity:65/294 - (22%)
Similarity:102/294 - (34%) Gaps:72/294 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RGHGLLIEELPFAVGP---KCNGPVV------------CLGCYEPNPDPEEELCSECGWPLC--- 77
            :|.||.... |||:|.   .|  |..            |..|:     ..:|..|:||  .|   
 Frog    15 KGRGLKATR-PFALGELLFSC--PAYTYVLTVNERGNHCEFCF-----ARKEGLSKCG--KCKQA 69

  Fly    78 ----VECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLLAKEANPERWDNE 138
                |:| |:.|....:||||.:         ...|...||.....:..|:|..::...||..:|
 Frog    70 FYCNVDC-QKGDWPMHKLECSAM---------CTYGQNWCPSETVRLTARILAKQKTQTERTASE 124

  Fly   139 ----VAPMEHHKEERQRDADVWHADRVNIAQYLRGPCQLANRFSEELIMQVVGVLEVNAFEARSP 199
                |...|.|..:...:.          .:.::......:||..:.:.......:|..|...:.
 Frog   125 RFLSVKDFESHLSKLDNEK----------LELIQNDIAALHRFYSKNLHYSDNAAQVFLFAQVNC 179

  Fly   200 KGYPLR---------CLFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEGQPLHHSYTYT 255
            .|:.:.         .:||...::.|:|.||.   |...:|....:||:.::..|..:..||...
 Frog   180 NGFTIEDEELSHLGSAIFPDVALMNHSCCPNV---IVTYKGTVAEVRAVQEIHAGDEVFTSYIDL 241

  Fly   256 LDGTAQRQKHLKQGKFFTCQCERC----LDPTEL 285
            |..|..|...|....||.|.|..|    .||.:|
 Frog   242 LYPTEDRNDRLIDSYFFNCDCRECSTKQKDPAKL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_609464.1 SET_SMYD <192..279 CDD:380997 23/95 (24%)
smyd2XP_002934751.2 SET_SMYD2 5..267 CDD:380979 62/284 (22%)
zf-MYND 50..88 CDD:460312 12/45 (27%)

Return to query results.
Submit another query.